Mercurial > repos > pjbriggs > amplicon_analysis_pipeline
comparison amplicon_analysis_pipeline.py @ 9:32a43bc3dd58 draft
planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit f72ff88ee11d09703bf38524dbb8026ee14bc3ef-dirty
| author | pjbriggs |
|---|---|
| date | Mon, 18 Jun 2018 07:17:52 -0400 |
| parents | 8292f8262a9d |
| children | b47cf1d6fb47 |
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| 8:8292f8262a9d | 9:32a43bc3dd58 |
|---|---|
| 98 | 98 |
| 99 def find_executable(name): | 99 def find_executable(name): |
| 100 # Locate executable on PATH | 100 # Locate executable on PATH |
| 101 for p in os.environ['PATH'].split(os.pathsep): | 101 for p in os.environ['PATH'].split(os.pathsep): |
| 102 exe = os.path.join(name) | 102 exe = os.path.join(name) |
| 103 if os.path.isfike(exe) os.access(exe,os.X_OK): | 103 if os.path.isfile(exe) and os.access(exe,os.X_OK): |
| 104 return exe | 104 return exe |
| 105 return None | 105 return None |
| 106 | 106 |
| 107 if __name__ == "__main__": | 107 if __name__ == "__main__": |
| 108 # Command line | 108 # Command line |
