comparison amplicon_analysis_pipeline.py @ 30:18e6427c5e4a draft

planemo upload for repository https://github.com/pjbriggs/Amplicon_analysis-galaxy commit 283f59740e90fa714c305007af40041ce39a74aa
author pjbriggs
date Tue, 02 Oct 2018 08:58:13 -0400
parents 31b7950136ed
children e832be1635b4
comparison
equal deleted inserted replaced
29:31b7950136ed 30:18e6427c5e4a
99 def find_executable(name): 99 def find_executable(name):
100 # Locate executable on PATH 100 # Locate executable on PATH
101 for p in os.environ['PATH'].split(os.pathsep): 101 for p in os.environ['PATH'].split(os.pathsep):
102 exe = os.path.normpath( 102 exe = os.path.normpath(
103 os.path.abspath(os.path.join(p,name))) 103 os.path.abspath(os.path.join(p,name)))
104 print "Checking %s" % exe
105 if os.path.isfile(exe) and os.access(exe,os.X_OK): 104 if os.path.isfile(exe) and os.access(exe,os.X_OK):
106 return exe 105 return exe
107 return None 106 return None
108 107
109 if __name__ == "__main__": 108 if __name__ == "__main__":