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1 <tool id="export" name="Export" version="1.0.0">
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2 <description>to a Local File</description>
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3 <command interpreter="perl">export.pl $symlink $dest $logfile
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4 #for $i in $files
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5 ${i.file} ${i.name}
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6 #end for
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7 </command>
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8 <inputs>
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9 <param name="symlink" type="select" display="radio" label="Copy or symlink files?">
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10 <option value="0">COPY the files so I may delete the files from Galaxy</option>
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11 <option value="1">SYMLINK the files; I will not delete the files from Galaxy</option>
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12 </param>
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13 <param name="dest" type="text" size='120' value="/home/galaxy/galaxy-work/" label="Destination folder" help="Must be writable by Galaxy user" />
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14 <repeat name="files" title="Files to export">
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15 <param name="file" type="data" format="data" label="File"/>
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16 <param name="name" type="text" size='20' value="" label="Name" />
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17 </repeat>
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18 </inputs>
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19 <outputs>
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20 <data name="logfile" format="txt" />
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21 </outputs>
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22 <help>
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23 **What it does**
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24
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25 This tool allows staff to export files from Galaxy to a specified NFS path.
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26
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27 The destination folder must be writable by the Galaxy user. It is suggested that you create a folder ~/dropbox and chmod 777 it.
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28 </help>
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29 </tool>
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