Mercurial > repos > pimarin > data_manager_bakta

view data_manager_conf.xml @ 0:9d08486abf8e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bakta commit 5f320f165a7f454193df36cc2ec77a87d50ec80f-dirty"
author pimarin
date Wed, 17 Aug 2022 14:42:22 +0000
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children faae5d8ce0cb
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<data_managers>
    <data_manager tool_file="data_manager/bakta_build_database.xml" id="bakta_build_database" version="2.1.1+galaxy0">
        <data_table name="bakta_database">
            <output>
                <column name="value"/>
                <column name="name"/>
                <column name="path" output_ref="output_file">
                    <move type="directory" relativize_symlinks="True">
                        <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${value}/bakta_database/${name}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${value}/bakta_database/${name}/${path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>