Mercurial > repos > pimarin > data_manager_bakta

diff data_manager/bakta_build_database.xml @ 12:7bd60bfa8ffc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bakta commit b082e89a0090f9c4b2a257bb06b7c6f141b42650-dirty
author pimarin
date Wed, 02 Nov 2022 14:35:26 +0000
parents c50e8b4f74d7
children 8f63e424da2b
line wrap: on
line diff
--- a/data_manager/bakta_build_database.xml	Wed Nov 02 11:06:36 2022 +0000
+++ b/data_manager/bakta_build_database.xml	Wed Nov 02 14:35:26 2022 +0000
@@ -5,14 +5,16 @@
         <import>macro.xml</import>
     </macros>
     <expand macro="requirements"/>
-    <expand macro="version_command"/>
 
-    <command detect_errors="aggressive"><![CDATA[
+    <command detect_errors="exit_code">
+      <![CDATA[
         python '$__tool_directory__/bakta_build_database.py'
         '$output_file'
         --database_version '$database_select'
-        '$test_data_manager'
-    ]]></command>
+        #if '$test_data_manager' != ''
+            '$test_data_manager'
+        #end if
+      ]]></command>
     <inputs>
         <param name="database_select" type="select" label="Database version" help="Choose a database version to download (default latest version)">
             <option value="latest" selected="true">Latest available version</option>