Mercurial > repos > pimarin > data_manager_bakta
comparison data_manager/bakta_build_database.xml @ 6:3b9969001f3f draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_bakta commit 2fa443ab6c1b3513a585123edd2cdf864e5123ae-dirty
| author | pimarin |
|---|---|
| date | Thu, 27 Oct 2022 15:07:44 +0000 |
| parents | b475dd46612e |
| children | 47a3aac8fcf7 |
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| 5:b475dd46612e | 6:3b9969001f3f |
|---|---|
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 8 <expand macro="version_command"/> | 8 <expand macro="version_command"/> |
| 9 | 9 |
| 10 <command detect_errors="aggressive"><![CDATA[ | 10 <command detect_errors="aggressive"><![CDATA[ |
| 11 mkdir ./output_file && | 11 mkdir 'output_file' && |
| 12 ln -s '$output_file' '/output_file/json_output' && | 12 ln -s '$output_file' 'output_file/json_output' && |
| 13 python '$__tool_directory__/bakta_build_database.py' | 13 python '$__tool_directory__/bakta_build_database.py' |
| 14 './output_file/json_output' | 14 './output_file/json_output' |
| 15 --database_version '$database_select' | 15 --database_version '$database_select' |
| 16 ]]></command> | 16 ]]></command> |
| 17 <inputs> | 17 <inputs> |