Mercurial > repos > pimarin > bakta
view test-data/TEST_5/TEST_5.log @ 11:f93f54a21132 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit ed22b0f3b7b651e240154a08c9313585def1cfe5
| author | pimarin |
|---|---|
| date | Mon, 13 Feb 2023 11:37:06 +0000 |
| parents | ed4bc0577be6 |
| children |
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parse genome sequences... imported: 1 filtered & revised: 1 plasmids: 1 start annotation... skip tRNA prediction... skip tmRNA prediction... skip rRNA prediction... skip ncRNA prediction... skip ncRNA region prediction... skip CRISPR array prediction... skip CDS prediction... skip sORF prediction... skip gap annotation... skip oriC/T annotation... apply feature overlap filters... select features and create locus tags... selected: 0 genome statistics: Genome size: 1,330 bp Contigs/replicons: 1 GC: 45.2 % N50: 1,330 N ratio: 0.0 % coding density: 0.0 % annotation summary: tRNAs: 0 tmRNAs: 0 rRNAs: 0 ncRNAs: 0 ncRNA regions: 0 CRISPR arrays: 0 CDSs: 0 hypotheticals: 0 pseudogenes: 0 signal peptides: 0 sORFs: 0 gaps: 0 oriCs/oriVs: 0 oriTs: 0 export annotation results to: /tmp/tmp3ft3p63j/job_working_directory/000/14/working human readable TSV... GFF3... INSDC GenBank & EMBL... genome sequences... feature nucleotide sequences... translated CDS sequences... circular genome plot... machine readable JSON... genome and annotation summary... If you use these results please cite Bakta: https://doi.org/10.1099/mgen.0.000685 Annotation successfully finished in 0:00 [mm:ss].