diff test-data/TEST_3/TEST_3.embl @ 3:eea334d9988b draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/bakta commit 73af464cc860250c3fa3dd433602283ab5a44f53-dirty

--- a/test-data/TEST_3/TEST_3.embl	Wed Aug 17 10:29:37 2022 +0000
+++ b/test-data/TEST_3/TEST_3.embl	Thu Dec 22 15:01:43 2022 +0000
@@ -1,4 +1,4 @@
-ID   contig_1; ; circular; DNA; ; PRO; 3306 BP.
+ID   contig_1; ; circular; DNA; ; PRO; 1330 BP.
 XX
 AC   contig_1;
 XX
@@ -8,16 +8,16 @@
 OC   .
 XX
 CC   Annotated with Bakta
-CC   Software: v1.4.2
-CC   Database: v3.0
+CC   Software: v1.6.1
+CC   Database: v4.0
 CC   DOI: 10.1099/mgen.0.000685
 CC   URL: github.com/oschwengers/bakta
 CC   
 CC   ##Genome Annotation Summary:##
-CC   Annotation Date                :: 08/17/2022, 09:35:50
+CC   Annotation Date                :: 12/19/2022, 10:21:03
 CC   Annotation Pipeline            :: Bakta
-CC   Annotation Software version    ::  v1.4.2
-CC   Annotation Database version    ::  v3.0
+CC   Annotation Software version    ::  v1.6.1
+CC   Annotation Database version    ::  v4.0
 CC   CDSs                           ::     0
 CC   tRNAs                          ::     0
 CC   tmRNAs                         ::     0
@@ -28,14 +28,15 @@
 CC   oriCs/oriVs                    ::     0
 CC   oriTs                          ::     0
 CC   gaps                           ::     0
+CC   pseudogenes                    ::     0
 XX
 FH   Key             Location/Qualifiers
 FH
-FT   source          1..3306
+FT   source          1..1330
 FT                   /mol_type="genomic DNA"
 FT                   /plasmid="unnamed1"
 XX
-SQ   Sequence 3306 BP; 797 A; 692 C; 743 G; 1074 T; 0 other;
+SQ   Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
      ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc        60
      gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc       120
      agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg       180
@@ -58,38 +59,5 @@
      taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa      1200
      aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc      1260
      tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg      1320
-     cttctatttg atatttttta tcttttttca taatttcaac ctagctacgc caccatctat      1380
-     taattggcaa acggtatcga tgattgcgat tgattctaat ttgttaattg tcttcgtgtc      1440
-     agctattcct ggtttcatat gaaacaaacc atgcctgttc tcatgccagt aagtgtagca      1500
-     ttcacacaaa acttccgcta tttcaccatt tatagtttct tggtgtattt ctctgattat      1560
-     atatttgggt ttgttttcag tgaagtattc gccaaggttc tttgatgatg atggattgca      1620
-     aacatcatta agtatttgat atataaagcc ttctatggct cttaatgcag agaagcagta      1680
-     tgttgagtaa tcttccattt cgacatctat ttttttcatt attagcgagc atgatagctg      1740
-     ttttttgata tcttcatgga ttttatcgat gctttttggt agtttgctat gcaactcgga      1800
-     ctcaatagtt tcttttttta tgtcaacatt aaattcttta tttttttgtt cgacaatctc      1860
-     tttcatgttt agtattgagc acatgaaatc gttaatcaaa ctcgcgattt gaaggtattt      1920
-     tccttggaat tgaatagagc cgcgcttgta aatttttgcc ctgaccctgt caccattgct      1980
-     ggtggtcata atatattggt gtttacaatt aggatcgtta ttattatctt ctgttattgt      2040
-     tatcccctct tcagaaagaa attcaaatag atttgccctg tcatcatcac tgaattttgg      2100
-     aatggtgtat tcaaagttct ttgtgtctga atacaaacag ttttctttta taatcaaggc      2160
-     gatttcatca aagtaagtgt tattttgccc agacgctctt ccgatagtgg tatttccgcc      2220
-     tgatggcatt agttttatta agaagtctat tcctttatat gtgccagata tgtgagtttc      2280
-     tctttcgttt tttacattag aggaatagtt tgtgacgcca ttctgcgtca gagcagactc      2340
-     aatcttgtca atattgatat ttagtgcttt aaacgggttc tgtgccattg ggtcaatccg      2400
-     ttgttttttt tgaatatgta cagatcttgt ttttttgtca acggaatagc tgttcgttga      2460
-     cttgatagac cgattgattc atcatctcat aaataaagaa aaaccaccgc taccaacggt      2520
-     ggttttctca aggttcgctg agctaccaac tctttgaacc aaggtaactg gcttggagga      2580
-     gcgcagtcac caaaatctgt tctttcagtt tagccttaac aggtgcataa cttcaagaca      2640
-     aactcctcta aatcagttac caatggctgc tgccagtggc gataagtcgt gtcttaccgg      2700
-     gttggactca agacgatagt taccggataa ggcgcagcgg tcgggctgaa cggggggttc      2760
-     gtgcacacag cccagcttgg agcgaacgac ctacaccgaa ctgagatacc aacagcgtga      2820
-     gctatgagaa agcgccacgc ttcccgaagg gagaaaggcg gacaggtatc cggtaagtgg      2880
-     cagggtcgga acaggagagc gcacgaggga gcttccgggg ggaaacgcct ggtatcttta      2940
-     tagtcctgtc gggtttcgcc acctctggct tgagcgtcga tttttgtgat gctcgtcagg      3000
-     ggggcggagc ctatggaaaa acgcctgcgg tgctggcttc ttccggtgct ttgctttttg      3060
-     ctcacatgtt ctttccggct ttatcccctg attctgtgga taaccgtatt accgcctttg      3120
-     agtgagctga caccgctcgc cgcagtcgaa cgaccgagcg tagcgagtca gtgagcgagg      3180
-     aagcggaaga gcgccttatg tgacattttc tccttacgct ctgttgtgcc gttcggcatc      3240
-     ctgccctgag cgttatatct ctgtgctatt ttctacttca aagcgtgtct gtatgctgtt      3300
-     ctggag                                                                 3306
+     cttctatttg                                                             1330
 //