Mercurial > repos > pimarin > abromics_galaxy_json_extractor

diff test-data/fastp/fastp_report.json @ 0:c49ec8c0b046 draft

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planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
author pimarin
date Sun, 04 Jun 2023 17:16:20 +0000
parents
children 421032d8dd5d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/fastp/fastp_report.json	Sun Jun 04 17:16:20 2023 +0000
@@ -0,0 +1,15 @@
+{"summary": {
+        "fastp_version": "0.23.2",
+        "sequencing": "paired end (301 cycles + 301 cycles)",
+        "before_filtering": {
+            "total_reads": 3489582,
+            "total_bases": 705053822,
+            "q20_bases": 672633294,
+            "q30_bases": 625189177,
+            "q20_rate": 0.954017,
+            "q30_rate": 0.886725,
+            "read1_mean_length": 201,
+            "read2_mean_length": 202,
+            "gc_content": 0.374995
+        }}
+}