Mercurial > repos > pimarin > abromics_galaxy_json_extractor

comparison test-data/isescan/summary.tsv @ 1:421032d8dd5d draft

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planemo upload commit 0a5fc6ee1a42b0c1c413de143a01559cb491c2e5-dirty
author pimarin
date Wed, 05 Jul 2023 14:24:55 +0000
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0:c49ec8c0b046 1:421032d8dd5d
1 # seqid family nIS %Genome bps4IS dnaLen
2 contig00001 IS21 1 0.29 1280 436224
3 contig00002 IS200/IS605 1 0.42 1071 252900
4 contig00002 IS21 1 1.70 4305 252900
5 contig00002 IS30 1 0.09 223 252900
6 contig00005 IS21 1 1.16 1542 132811
7 contig00005 IS30 1 2.24 2980 132811
8 contig00008 IS30 1 0.12 118 99915
9 contig00010 IS256 3 5.11 4701 92075
10 contig00010 IS3 1 1.87 1725 92075
11 contig00010 IS6 1 0.15 138 92075
12 contig00010 ISL3 1 1.85 1703 92075
13 contig00017 ISL3 1 2.66 1715 64537
14 contig00029 IS30 1 4.33 1052 24296
15 contig00030 IS30 1 0.49 118 23952
16 contig00035 IS3 1 5.84 911 15587
17 contig00036 IS256 2 17.14 2624 15306
18 contig00036 IS3 1 9.64 1476 15306
19 contig00036 IS30 1 0.76 117 15306
20 contig00036 ISL3 1 8.53 1305 15306
21 contig00043 IS256 1 10.78 964 8939
22 contig00043 IS6 1 9.05 809 8939
23 contig00045 IS30 1 1.69 117 6929
24 contig00053 IS110 1 76.23 1353 1775
25 contig00056 ISL3 1 92.01 1404 1526
26 contig00057 IS3 1 99.27 1504 1515
27 contig00058 IS30 1 100.00 1299 1299
28 contig00059 IS30 1 75.31 491 652
29 contig00062 IS6 1 63.81 335 525
30 contig00070 IS6 1 100.00 332 332
31 contig00076 IS30 1 87.45 223 255
32 contig00079 IS30 1 100.00 255 255
33 contig00083 IS6 2 97.65 249 255
34 contig00085 IS30 1 100.00 255 255
35 contig00090 IS6 1 100.00 250 250
36 contig00093 IS6 1 100.00 231 231
37 contig00094 IS6 1 66.99 138 206
38 contig00096 IS30 1 100.00 161 161
39 contig00097 IS6 1 100.00 151 151
40 contig00098 IS30 1 100.00 138 138
41 10_Enterococcus_faecalis_S17_L001.fasta total 43 1.31 39763 3027634