Mercurial > repos > pimarin > abromics_extractor_summarize

annotate test-data/fastp/fastp_report.json @ 0:35704a6837a7 draft

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planemo upload commit bb69b191fe3ce756655bf90af4d69e4472f94ba9-dirty
author pimarin
date Sun, 04 Jun 2023 17:15:36 +0000
parents
children 869509bc478e
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 {"summary": {
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2 "fastp_version": "0.23.2",
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3 "sequencing": "paired end (301 cycles + 301 cycles)",
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4 "before_filtering": {
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5 "total_reads": 3489582,
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6 "total_bases": 705053822,
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7 "q20_bases": 672633294,
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8 "q30_bases": 625189177,
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9 "q20_rate": 0.954017,
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10 "q30_rate": 0.886725,
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11 "read1_mean_length": 201,
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12 "read2_mean_length": 202,
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13 "gc_content": 0.374995
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14 }}
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15 }