Mercurial > repos > peterjc > venn_list
changeset 10:c2ad70398fda draft
Uploaded v0.0.8a, declare Biopython dependency via Tool Shed
| author | peterjc |
|---|---|
| date | Wed, 29 Apr 2015 11:02:56 -0400 |
| parents | b7d17d1228d9 |
| children | 842a790502bb |
| files | tools/venn_list/README.rst tools/venn_list/tool_dependencies.xml |
| diffstat | 2 files changed, 9 insertions(+), 1 deletions(-) [+] |
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--- a/tools/venn_list/README.rst Wed Apr 29 10:57:14 2015 -0400 +++ b/tools/venn_list/README.rst Wed Apr 29 11:02:56 2015 -0400 @@ -68,6 +68,7 @@ v0.0.8 - Reorder XML elements (internal change only). - Fixed and improved error handling when rpy is not available. - Test output relaxed to cope with more variation in PDF output. + - Declare Biopython dependency via the Tool Shed. ======= ====================================================================== @@ -83,7 +84,7 @@ For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use the following command from the Galaxy root folder:: - $ tar -czf venn_list.tar.gz tools/venn_list/README.rst tools/venn_list/venn_list.* test-data/magic.pdf test-data/venn_list.tabular test-data/rhodopsin_proteins.fasta + $ tar -czf venn_list.tar.gz tools/venn_list/README.rst tools/venn_list/venn_list.* tools/venn_list/tool_dependencies.xml test-data/magic.pdf test-data/venn_list.tabular test-data/rhodopsin_proteins.fasta Check this worked:: @@ -91,6 +92,7 @@ tools/venn_list/README.rst tools/venn_list/venn_list.py tools/venn_list/venn_list.xml + tools/venn_list/tool_dependencies.xml test-data/magic.pdf test-data/venn_list.tabular test-data/rhodopsin_proteins.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/venn_list/tool_dependencies.xml Wed Apr 29 11:02:56 2015 -0400 @@ -0,0 +1,6 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="biopython" version="1.65"> + <repository changeset_revision="f8d72690eeae" name="package_biopython_1_65" owner="biopython" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> +</tool_dependency>