comparison tools/protein_analysis/signalp3.xml @ 17:af3174637834 draft

Uploaded v0.2.5 preview 1, adding links to Tool Shed entry

16:1d5486a02bc4

<tool id="signalp3" name="SignalP 3.0" version="0.0.11">
    <description>Find signal peptides in protein sequences</description>
    <!-- If job splitting is enabled, break up the query file into parts -->
    <!-- Using 2000 chunks meaning 4 threads doing 500 each is ideal -->
    <parallelism method="basic" split_inputs="fasta_file" split_mode="to_size" split_size="2000" merge_outputs="tabular_file"></parallelism>
    <command interpreter="python">

AAAI Press, Menlo Park, California, pp. 122-130, 1998.
http://www.ncbi.nlm.nih.gov/pubmed/9783217

http://www.cbs.dtu.dk/services/SignalP-3.0/output.php

    </help>
</tool>

17:af3174637834

<tool id="signalp3" name="SignalP 3.0" version="0.0.12">
    <description>Find signal peptides in protein sequences</description>
    <!-- If job splitting is enabled, break up the query file into parts -->
    <!-- Using 2000 chunks meaning 4 threads doing 500 each is ideal -->
    <parallelism method="basic" split_inputs="fasta_file" split_mode="to_size" split_size="2000" merge_outputs="tabular_file"></parallelism>
    <command interpreter="python">

AAAI Press, Menlo Park, California, pp. 122-130, 1998.
http://www.ncbi.nlm.nih.gov/pubmed/9783217

http://www.cbs.dtu.dk/services/SignalP-3.0/output.php

This wrapper is available to install into other Galaxy Instances via the Galaxy
Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/tmhmm_and_signalp
    </help>
</tool>