Mercurial > repos > peterjc > seq_rename
changeset 10:19e51d9a4448 draft
Uploaded v0.0.4f, fixed Biopython dependency setup
| author | peterjc |
|---|---|
| date | Fri, 13 Sep 2013 06:11:12 -0400 |
| parents | 5a1b7d0d9f27 |
| children | 5454df5d9dfc |
| files | tools/filters/seq_rename.xml |
| diffstat | 1 files changed, 4 insertions(+), 3 deletions(-) [+] |
line wrap: on
line diff
--- a/tools/filters/seq_rename.xml Thu Sep 12 11:18:20 2013 -0400 +++ b/tools/filters/seq_rename.xml Fri Sep 13 06:11:12 2013 -0400 @@ -1,5 +1,9 @@ <tool id="seq_rename" name="Rename sequences" version="0.0.4"> <description>with ID mapping from a tabular file</description> + <requirements> + <requirement type="package" version="1.61">biopython</requirement> + <requirement type="python-module">Bio</requirement> + </requirements> <version_commmand interpreter="python">seq_rename.py --version</version_commmand> <command interpreter="python"> seq_rename.py $input_tabular $old_column $new_column $input_file $input_file.ext $output_file @@ -44,9 +48,6 @@ <output name="output_file" file="four_human_proteins.rename.fasta" ftype="fasta" /> </test> </tests> - <requirements> - <requirement type="python-module">Bio</requirement> - </requirements> <help> **What it does**