# HG changeset patch
# User peterjc
# Date 1384967492 18000
# Node ID 61cec46f6be595505f649c62ba5d988ce85d3476
# Parent  d08767ae73cef7b003167fa58eaebe8021aa6a38
Uploaded v0.0.5, corrected automated dependency definition

diff -r d08767ae73ce -r 61cec46f6be5 tools/seq_rename/README.rst
--- a/tools/seq_rename/README.rst	Fri Sep 27 06:10:29 2013 -0400
+++ b/tools/seq_rename/README.rst	Wed Nov 20 12:11:32 2013 -0500
@@ -70,6 +70,7 @@
         - Updated citation information (Cock et al. 2013).
         - Development moved to GitHub, https://github.com/peterjc/pico_galaxy
         - Renamed folder and adopted README.rst naming.
+v0.0.5  - Correct automated dependency definition
 ======= ======================================================================
 
 
@@ -85,7 +86,7 @@
 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use
 the following command from the Galaxy root folder::
 
-    $ tar -czf seq_rename.tar.gz tools/seq_rename/README.rst tools/seq_rename/seq_rename.* tools/seq_rename/repository_dependencies.xml test-data/four_human_proteins.fasta test-data/four_human_proteins.rename.tabular test-data/four_human_proteins.rename.fasta
+    $ tar -czf seq_rename.tar.gz tools/seq_rename/README.rst tools/seq_rename/seq_rename.* tools/seq_rename/tool_dependencies.xml test-data/four_human_proteins.fasta test-data/four_human_proteins.rename.tabular test-data/four_human_proteins.rename.fasta
 
 Check this worked::
 
@@ -93,7 +94,7 @@
     tools/seq_rename/README.rst
     tools/seq_rename/seq_rename.py
     tools/seq_rename/seq_rename.xml
-    tools/seq_rename/repository_dependencies.xml
+    tools/seq_rename/tool_dependencies.xml
     test-data/four_human_proteins.fasta
     test-data/four_human_proteins.rename.tabular
     test-data/four_human_proteins.rename.fasta
diff -r d08767ae73ce -r 61cec46f6be5 tools/seq_rename/repository_dependencies.xml
--- a/tools/seq_rename/repository_dependencies.xml	Fri Sep 27 06:10:29 2013 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-<?xml version="1.0"?>
-<repositories description="This requires Biopython as a dependency.">
-<!-- Leave out the tool shed and revision to get the current
-     tool shed and latest revision at the time of upload -->
-<repository changeset_revision="ac9cc2992b69" name="package_biopython_1_62" owner="biopython" toolshed="http://testtoolshed.g2.bx.psu.edu" />
-</repositories>
diff -r d08767ae73ce -r 61cec46f6be5 tools/seq_rename/tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/seq_rename/tool_dependencies.xml	Wed Nov 20 12:11:32 2013 -0500
@@ -0,0 +1,6 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="biopython" version="1.62">
+        <repository changeset_revision="ac9cc2992b69" name="package_biopython_1_62" owner="biopython" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>