# HG changeset patch
# User peterjc
# Date 1384967415 18000
# Node ID 42bca649ec44aa382a6b058c1d73813410e94283
# Parent  834cf6618a14d78ea6fdc5c5e42021a9975a1090
Uploaded v0.0.11, corrected automated dependency definition

diff -r 834cf6618a14 -r 42bca649ec44 tools/seq_primer_clip/README.rst
--- a/tools/seq_primer_clip/README.rst	Fri Sep 27 06:16:34 2013 -0400
+++ b/tools/seq_primer_clip/README.rst	Wed Nov 20 12:10:15 2013 -0500
@@ -61,6 +61,7 @@
         - Automated installation of Biopython dependency.
         - Development moved to GitHub, https://github.com/peterjc/pico_galaxy
         - Renamed folder and adopted README.rst naming.
+v0.0.11 - Correct automated dependency definition.
 ======= ======================================================================
 
 
@@ -77,7 +78,7 @@
 For making the "Galaxy Tool Shed" http://toolshed.g2.bx.psu.edu/ tarball use
 the following command from the Galaxy root folder::
 
-    $ tar -czf seq_primer_clip.tar.gz tools/seq_primer_clip/README.rst tools/seq_primer_clip/seq_primer_clip.* tools/seq_primer_clip/repository_dependencies.xml test-data/dop_primers.fasta test-data/MID4_GLZRM4E04_rnd30*
+    $ tar -czf seq_primer_clip.tar.gz tools/seq_primer_clip/README.rst tools/seq_primer_clip/seq_primer_clip.* tools/seq_primer_clip/tool_dependencies.xml test-data/dop_primers.fasta test-data/MID4_GLZRM4E04_rnd30*
 
 Check this worked::
 
@@ -85,7 +86,7 @@
     tools/seq_primer_clip/README.rst
     tools/seq_primer_clip/seq_primer_clip.xml
     tools/seq_primer_clip/seq_primer_clip.py
-    tools/seq_primer_clip/repository_dependencies.xml
+    tools/seq_primer_clip/tool_dependencies.xml
     test-data/dop_primers.fasta
     test-data/MID4_GLZRM4E04_rnd30.fasta
     test-data/MID4_GLZRM4E04_rnd30.fastqsanger
diff -r 834cf6618a14 -r 42bca649ec44 tools/seq_primer_clip/repository_dependencies.xml
--- a/tools/seq_primer_clip/repository_dependencies.xml	Fri Sep 27 06:16:34 2013 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-<?xml version="1.0"?>
-<repositories description="This requires Biopython as a dependency.">
-<!-- Leave out the tool shed and revision to get the current
-     tool shed and latest revision at the time of upload -->
-<repository changeset_revision="ac9cc2992b69" name="package_biopython_1_62" owner="biopython" toolshed="http://testtoolshed.g2.bx.psu.edu" />
-</repositories>
diff -r 834cf6618a14 -r 42bca649ec44 tools/seq_primer_clip/tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/seq_primer_clip/tool_dependencies.xml	Wed Nov 20 12:10:15 2013 -0500
@@ -0,0 +1,6 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="biopython" version="1.62">
+        <repository changeset_revision="ac9cc2992b69" name="package_biopython_1_62" owner="biopython" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>