# HG changeset patch
# User peterjc
# Date 1541779832 18000
# Node ID 3c37b27efa2fe39b98192d853fb551780f881bcc
# Parent  fe9a5c9346709e1e3cff5f63e4713864084464b5
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_primer_clip commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty

diff -r fe9a5c934670 -r 3c37b27efa2f tools/seq_primer_clip/seq_primer_clip.py
--- a/tools/seq_primer_clip/seq_primer_clip.py	Fri Sep 15 10:30:55 2017 -0400
+++ b/tools/seq_primer_clip/seq_primer_clip.py	Fri Nov 09 11:10:32 2018 -0500
@@ -34,7 +34,7 @@
 import sys
 
 if "-v" in sys.argv or "--version" in sys.argv:
-    print("v0.0.16")
+    print("v0.0.17")
     sys.exit(0)
 
 from galaxy_utils.sequence.fasta import fastaReader, fastaWriter
@@ -122,7 +122,7 @@
 }
 
 ambiguous_dna_re = {}
-for letter, values in ambiguous_dna_values.iteritems():
+for letter, values in ambiguous_dna_values.items():
     if len(values) == 1:
         ambiguous_dna_re[letter] = values
     else:
diff -r fe9a5c934670 -r 3c37b27efa2f tools/seq_primer_clip/seq_primer_clip.xml
--- a/tools/seq_primer_clip/seq_primer_clip.xml	Fri Sep 15 10:30:55 2017 -0400
+++ b/tools/seq_primer_clip/seq_primer_clip.xml	Fri Nov 09 11:10:32 2018 -0500
@@ -118,7 +118,7 @@
 
 Cock et al 2009. Biopython: freely available Python tools for computational
 molecular biology and bioinformatics. Bioinformatics 25(11) 1422-3.
-http://dx.doi.org/10.1093/bioinformatics/btp163 pmid:19304878.
+https://doi.org/10.1093/bioinformatics/btp163 pmid:19304878.
 
 This tool is available to install into other Galaxy Instances via the Galaxy
 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/seq_primer_clip