Mercurial > repos > peterjc > rxlr_venn_workflow
changeset 17:ee386f28dfab draft default tip
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/workflows/rxlr_venn_workflow commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty
author | peterjc |
---|---|
date | Fri, 09 Nov 2018 11:15:23 -0500 |
parents | 043e89e2ecb5 |
children | |
files | README.rst repository_dependencies.xml |
diffstat | 2 files changed, 6 insertions(+), 6 deletions(-) [+] |
line wrap: on
line diff
--- a/README.rst Fri Sep 15 10:32:38 2017 -0400 +++ b/README.rst Fri Nov 09 11:15:23 2018 -0500 @@ -63,24 +63,24 @@ Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). Galaxy tools and workflows for sequence analysis with applications in molecular plant pathology. PeerJ 1:e167 -http://dx.doi.org/10.7717/peerj.167 +https://doi.org/10.7717/peerj.167 For the three underlying methods, please cite: Whisson, S.C., Boevink, C.V., Moleleki, L., et al. (2007) A translocation signal for delivery of oomycete effector proteins into host plant cells. Nature 450:115-118. -http://dx.doi.org/10.1038/nature06203 +https://doi.org/10.1038/nature06203 Win, J., Morgan, W., Bos, J., et al. (2007) Adaptive evolution has targeted the C-terminal domain of the RXLR effectors of plant pathogenic oomycetes. The Plant Cell 19:2349-2369. -http://dx.doi.org/10.1105/tpc.107.051037 +https://doi.org/10.1105/tpc.107.051037 Bhattacharjee, S., Luisa Hiller, N., Liolios, K., et al. (2006) The malarial host-targeting signal is conserved in the Irish potato famine pathogen. PLoS Pathogens 2(5):e50. -http://dx.doi.org/10.1371/journal.ppat.0020050 +https://doi.org/10.1371/journal.ppat.0020050 Dependencies
--- a/repository_dependencies.xml Fri Sep 15 10:32:38 2017 -0400 +++ b/repository_dependencies.xml Fri Nov 09 11:15:23 2018 -0500 @@ -1,9 +1,9 @@ <?xml version="1.0"?> <repositories description="This requires my SignalP and TMHMM wrapers, and my FASTA filtering tool."> <!-- Revision 15:6abd809cefdd on the main tool shed is v0.2.4, the current latest - but older should be OK --> - <repository changeset_revision="3cb02adf4326" name="tmhmm_and_signalp" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="3c9bbbc6cbbe" name="tmhmm_and_signalp" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> <!-- Revision 2:abdd608c869b on the main tool shed is v0.0.5, the current latest - but older should be OK --> - <repository changeset_revision="735dfff31c1d" name="seq_filter_by_id" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + <repository changeset_revision="bc608928a007" name="seq_filter_by_id" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> <!-- Revisiion 2:c96bef0643dc on the main tool shed is v0.0.3, the current latest --> <repository changeset_revision="7e2b53fd03af" name="venn_list" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </repositories>