Mercurial > repos > peterjc > rxlr_venn_workflow

changeset 17:ee386f28dfab draft default tip

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planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/workflows/rxlr_venn_workflow commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty
author peterjc
date Fri, 09 Nov 2018 11:15:23 -0500
parents 043e89e2ecb5
children
files README.rst repository_dependencies.xml
diffstat 2 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/README.rst	Fri Sep 15 10:32:38 2017 -0400
+++ b/README.rst	Fri Nov 09 11:15:23 2018 -0500
@@ -63,24 +63,24 @@
 Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013).
 Galaxy tools and workflows for sequence analysis with applications
 in molecular plant pathology. PeerJ 1:e167
-http://dx.doi.org/10.7717/peerj.167
+https://doi.org/10.7717/peerj.167
 
 For the three underlying methods, please cite:
 
 Whisson, S.C., Boevink, C.V., Moleleki, L., et al. (2007)
 A translocation signal for delivery of oomycete effector proteins into
 host plant cells. Nature 450:115-118.
-http://dx.doi.org/10.1038/nature06203
+https://doi.org/10.1038/nature06203
 
 Win, J., Morgan, W., Bos, J., et al. (2007)
 Adaptive evolution has targeted the C-terminal domain of the RXLR effectors
 of plant pathogenic oomycetes. The Plant Cell 19:2349-2369.
-http://dx.doi.org/10.1105/tpc.107.051037
+https://doi.org/10.1105/tpc.107.051037
 
 Bhattacharjee, S., Luisa Hiller, N., Liolios, K., et al. (2006)
 The malarial host-targeting signal is conserved in the Irish potato famine
 pathogen. PLoS Pathogens 2(5):e50.
-http://dx.doi.org/10.1371/journal.ppat.0020050
+https://doi.org/10.1371/journal.ppat.0020050
 
 
 Dependencies
--- a/repository_dependencies.xml	Fri Sep 15 10:32:38 2017 -0400
+++ b/repository_dependencies.xml	Fri Nov 09 11:15:23 2018 -0500
@@ -1,9 +1,9 @@
 <?xml version="1.0"?>
 <repositories description="This requires my SignalP and TMHMM wrapers, and my FASTA filtering tool.">
     <!-- Revision 15:6abd809cefdd on the main tool shed is v0.2.4, the current latest - but older should be OK -->
-    <repository changeset_revision="3cb02adf4326" name="tmhmm_and_signalp" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="3c9bbbc6cbbe" name="tmhmm_and_signalp" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     <!-- Revision 2:abdd608c869b on the main tool shed is v0.0.5, the current latest - but older should be OK -->
-    <repository changeset_revision="735dfff31c1d" name="seq_filter_by_id" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <repository changeset_revision="bc608928a007" name="seq_filter_by_id" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     <!-- Revisiion 2:c96bef0643dc on the main tool shed is v0.0.3, the current latest -->
     <repository changeset_revision="7e2b53fd03af" name="venn_list" owner="peterjc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
 </repositories>