# HG changeset patch
# User peterjc
# Date 1385646615 18000
# Node ID 5402f9b0d508ef5442614d906b99132caf8c031b
# Parent b2795652d2b425348796f6081dd212a68776d45b
Uploaded v0.0.22b, using BLAST+ 2.2.28 now
diff -r b2795652d2b4 -r 5402f9b0d508 test-data/blastp_four_human_vs_rhodopsin.xml
--- a/test-data/blastp_four_human_vs_rhodopsin.xml Mon Nov 25 10:58:46 2013 -0500
+++ b/test-data/blastp_four_human_vs_rhodopsin.xml Thu Nov 28 08:50:15 2013 -0500
@@ -2,7 +2,7 @@
blastp
- BLASTP 2.2.27+
+ BLASTP 2.2.28+
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
sp|Q9BS26|ERP44_HUMAN
@@ -17,630 +17,649 @@
F
-
-
- 1
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 2
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 3
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 4
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 5
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 6
- sp|Q9BS26|ERP44_HUMAN
- Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 30
- 119568
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 7
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 8
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 9
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 10
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 11
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 12
- sp|Q9NSY1|BMP2K_HUMAN
- BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 38
- 348130
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 13
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 14
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 15
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 16
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 17
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 18
- sp|P06213|INSR_HUMAN
- Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 39
- 414987
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 19
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|57163783|ref|NP_001009242.1|
- rhodopsin [Felis catus]
- NP_001009242
- 348
-
-
- 1
- 701.049
- 1808
- 0
- 1
- 348
- 1
- 348
- 0
- 0
- 336
- 343
- 0
- 348
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
- 20
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|3024260|sp|P56514.1|OPSD_BUFBU
- RecName: Full=Rhodopsin
- P56514
- 354
-
-
- 1
- 619.002
- 1595
- 0
- 1
- 341
- 1
- 342
- 0
- 0
- 290
- 322
- 1
- 342
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE
- MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE
- MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
- 21
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|283855846|gb|ADB45242.1|
- rhodopsin [Cynopterus brachyotis]
- ADB45242
- 328
-
-
- 1
- 653.284
- 1684
- 0
- 11
- 338
- 1
- 328
- 0
- 0
- 311
- 321
- 0
- 328
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS
- VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
- VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
- 22
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|283855823|gb|ADB45229.1|
- rhodopsin [Myotis pilosus]
- ADB45229
- 328
-
-
- 1
- 631.328
- 1627
- 0
- 11
- 338
- 1
- 328
- 0
- 0
- 311
- 323
- 0
- 328
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS
- VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
- VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
- 23
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|223523|prf||0811197A
- rhodopsin [Bos taurus]
- 0811197A
- 347
-
-
- 1
- 673.315
- 1736
- 0
- 1
- 348
- 1
- 347
- 0
- 0
- 324
- 336
- 1
- 348
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGID YT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
- 24
- sp|P08100|OPSD_HUMAN
- Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- gi|12583665|dbj|BAB21486.1|
- fresh water form rod opsin [Conger myriaster]
- BAB21486
- 354
-
-
- 1
- 599.356
- 1544
- 0
- 1
- 341
- 1
- 342
- 0
- 0
- 281
- 314
- 1
- 342
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE
- MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE
- MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +D ASAT SKTE
-
-
-
-
-
-
- 0
- 0
- 29
- 101761
- 0.041
- 0.267
- 0.14
-
-
-
-
-
\ No newline at end of file
+
+
+ 1
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 2
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 3
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 4
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 5
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 6
+ sp|Q9BS26|ERP44_HUMAN
+ Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 30
+ 119568
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 7
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 8
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 9
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 10
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 11
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 12
+ sp|Q9NSY1|BMP2K_HUMAN
+ BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 38
+ 348130
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 13
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 14
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 15
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 16
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 17
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 18
+ sp|P06213|INSR_HUMAN
+ Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 39
+ 414987
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 19
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|57163783|ref|NP_001009242.1|
+ rhodopsin [Felis catus]
+ NP_001009242
+ 348
+
+
+ 1
+ 701.049
+ 1808
+ 0
+ 1
+ 348
+ 1
+ 348
+ 0
+ 0
+ 336
+ 343
+ 0
+ 348
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 20
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|3024260|sp|P56514.1|OPSD_BUFBU
+ RecName: Full=Rhodopsin
+ P56514
+ 354
+
+
+ 1
+ 619.002
+ 1595
+ 0
+ 1
+ 341
+ 1
+ 342
+ 0
+ 0
+ 290
+ 322
+ 1
+ 342
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE
+ MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE
+ MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 21
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|283855846|gb|ADB45242.1|
+ rhodopsin [Cynopterus brachyotis]
+ ADB45242
+ 328
+
+
+ 1
+ 653.284
+ 1684
+ 0
+ 11
+ 338
+ 1
+ 328
+ 0
+ 0
+ 311
+ 321
+ 0
+ 328
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS
+ VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
+ VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 22
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|283855823|gb|ADB45229.1|
+ rhodopsin [Myotis pilosus]
+ ADB45229
+ 328
+
+
+ 1
+ 631.328
+ 1627
+ 0
+ 11
+ 338
+ 1
+ 328
+ 0
+ 0
+ 311
+ 323
+ 0
+ 328
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS
+ VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS
+ VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 23
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|223523|prf||0811197A
+ rhodopsin [Bos taurus]
+ 0811197A
+ 347
+
+
+ 1
+ 673.315
+ 1736
+ 0
+ 1
+ 348
+ 1
+ 347
+ 0
+ 0
+ 324
+ 336
+ 1
+ 348
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGID YT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 24
+ sp|P08100|OPSD_HUMAN
+ Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ gi|12583665|dbj|BAB21486.1|
+ fresh water form rod opsin [Conger myriaster]
+ BAB21486
+ 354
+
+
+ 1
+ 599.356
+ 1544
+ 0
+ 1
+ 341
+ 1
+ 342
+ 0
+ 0
+ 281
+ 314
+ 1
+ 342
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE
+ MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE
+ MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +D ASAT SKTE
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 101761
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+
+
diff -r b2795652d2b4 -r 5402f9b0d508 test-data/blastx_rhodopsin_vs_four_human.xml
--- a/test-data/blastx_rhodopsin_vs_four_human.xml Mon Nov 25 10:58:46 2013 -0500
+++ b/test-data/blastx_rhodopsin_vs_four_human.xml Thu Nov 28 08:50:15 2013 -0500
@@ -2,7 +2,7 @@
blastx
- BLASTX 2.2.27+
+ BLASTX 2.2.28+
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query_1
@@ -17,706 +17,725 @@
L;
-
-
- 1
- Query_1
- gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 2
- Query_1
- gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 3
- Query_1
- gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 4
- Query_1
- gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
- 1047
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 639.032
- 1647
- 0
- 1
- 1044
- 1
- 348
- 1
- 0
- 336
- 343
- 0
- 348
- MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
-
-
- 5
- Query_2
- gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
- 1574
-
-
-
- 0
- 0
- 33
- 183143
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 6
- Query_2
- gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
- 1574
-
-
-
- 0
- 0
- 33
- 183143
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 7
- Query_2
- gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
- 1574
-
-
-
- 0
- 0
- 33
- 183143
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 8
- Query_2
- gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
- 1574
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 551.206
- 1419
- 0
- 42
- 1037
- 1
- 332
- 3
- 0
- 283
- 315
- 0
- 332
- MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDD
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE
- MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+
-
-
-
-
-
-
- 0
- 0
- 33
- 183143
- 0.041
- 0.267
- 0.14
-
-
-
-
- 9
- Query_3
- gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
- 4301
-
-
-
- 0
- 0
- 40
- 509838
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 10
- Query_3
- gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
- 4301
-
-
-
- 0
- 0
- 40
- 509838
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 11
- Query_3
- gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
- 4301
-
-
-
- 0
- 0
- 40
- 509838
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 12
- Query_3
- gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
- 4301
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 220.32
- 560
- 4.29169e-67
- 1
- 333
- 11
- 121
- 1
- 0
- 107
- 109
- 0
- 111
- VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG
- VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG
-
-
- 2
- 127.487
- 319
- 1.95079e-35
- 3174
- 3368
- 248
- 312
- 3
- 0
- 60
- 64
- 0
- 65
- KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ
- KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ
- KEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ
-
-
- 3
- 121.324
- 303
- 1.96633e-33
- 2855
- 3031
- 177
- 235
- 2
- 0
- 54
- 57
- 0
- 59
- RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS
- RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA
- RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +
-
-
- 4
- 97.0561
- 240
- 1.16473e-25
- 1404
- 1580
- 119
- 177
- 3
- 0
- 55
- 56
- 0
- 59
- LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR
- LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR
- L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR
-
-
- 5
- 56.9954
- 136
- 1.23645e-12
- 4222
- 4299
- 312
- 337
- 1
- 0
- 23
- 24
- 0
- 26
- QFRNCMLTTLCCGKNPLGDDEASTTA
- QFRNCMLTTICCGKNPLGDDEASATV
- QFRNCMLTT+CCGKNPLGDDEAS T
-
-
-
-
-
-
- 0
- 0
- 40
- 509838
- 0.041
- 0.267
- 0.14
-
-
-
-
- 13
- Query_4
- gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
- 983
-
-
-
- 0
- 0
- 29
- 112346
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 14
- Query_4
- gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
- 983
-
-
-
- 0
- 0
- 29
- 112346
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 15
- Query_4
- gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
- 983
-
-
-
- 0
- 0
- 29
- 112346
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 16
- Query_4
- gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
- 983
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 589.341
- 1518
- 0
- 1
- 978
- 11
- 336
- 1
- 0
- 310
- 322
- 0
- 326
- VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT
- VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T
-
-
-
-
-
-
- 0
- 0
- 29
- 112346
- 0.041
- 0.267
- 0.14
-
-
-
-
- 17
- Query_5
- gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 18
- Query_5
- gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 19
- Query_5
- gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
- 1047
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 20
- Query_5
- gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
- 1047
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 619.387
- 1596
- 0
- 1
- 1044
- 1
- 348
- 1
- 0
- 325
- 337
- 0
- 348
- MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 30
- 119944
- 0.041
- 0.267
- 0.14
-
-
-
-
- 21
- Query_6
- gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
- 1344
-
-
-
- 0
- 0
- 32
- 155584
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 22
- Query_6
- gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
- 1344
-
-
-
- 0
- 0
- 32
- 155584
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 23
- Query_6
- gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
- 1344
-
-
-
- 0
- 0
- 32
- 155584
- 0.041
- 0.267
- 0.14
-
-
- No hits found
-
-
- 24
- Query_6
- gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
- 1344
-
-
- 1
- Subject_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- Subject_4
- 348
-
-
- 1
- 532.717
- 1371
- 0
- 23
- 1021
- 1
- 333
- 2
- 0
- 272
- 307
- 0
- 333
- MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDG
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA
- MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++
-
-
-
-
-
-
- 0
- 0
- 32
- 155584
- 0.041
- 0.267
- 0.14
-
-
-
-
-
\ No newline at end of file
+
+
+ 1
+ Query_1
+ gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 2
+ Query_1
+ gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 3
+ Query_1
+ gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 4
+ Query_1
+ gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
+ 1047
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 639.032
+ 1647
+ 0
+ 1
+ 1044
+ 1
+ 348
+ 1
+ 0
+ 336
+ 343
+ 0
+ 348
+ MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 5
+ Query_2
+ gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
+ 1574
+
+
+
+
+ 0
+ 0
+ 33
+ 183143
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 6
+ Query_2
+ gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
+ 1574
+
+
+
+
+ 0
+ 0
+ 33
+ 183143
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 7
+ Query_2
+ gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
+ 1574
+
+
+
+
+ 0
+ 0
+ 33
+ 183143
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 8
+ Query_2
+ gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
+ 1574
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 551.206
+ 1419
+ 0
+ 42
+ 1037
+ 1
+ 332
+ 3
+ 0
+ 283
+ 315
+ 0
+ 332
+ MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDD
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDE
+ MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+
+
+
+
+
+
+
+ 0
+ 0
+ 33
+ 183143
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 9
+ Query_3
+ gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
+ 4301
+
+
+
+
+ 0
+ 0
+ 40
+ 509838
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 10
+ Query_3
+ gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
+ 4301
+
+
+
+
+ 0
+ 0
+ 40
+ 509838
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 11
+ Query_3
+ gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
+ 4301
+
+
+
+
+ 0
+ 0
+ 40
+ 509838
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 12
+ Query_3
+ gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
+ 4301
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 220.32
+ 560
+ 4.29169e-67
+ 1
+ 333
+ 11
+ 121
+ 1
+ 0
+ 107
+ 109
+ 0
+ 111
+ VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG
+ VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG
+
+
+ 2
+ 127.487
+ 319
+ 1.95079e-35
+ 3174
+ 3368
+ 248
+ 312
+ 3
+ 0
+ 60
+ 64
+ 0
+ 65
+ KEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ
+ KEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ
+ KEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ
+
+
+ 3
+ 121.324
+ 303
+ 1.96633e-33
+ 2855
+ 3031
+ 177
+ 235
+ 2
+ 0
+ 54
+ 57
+ 0
+ 59
+ RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS
+ RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA
+ RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +
+
+
+ 4
+ 97.0561
+ 240
+ 1.16473e-25
+ 1404
+ 1580
+ 119
+ 177
+ 3
+ 0
+ 55
+ 56
+ 0
+ 59
+ LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR
+ LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR
+ L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR
+
+
+ 5
+ 56.9954
+ 136
+ 1.23645e-12
+ 4222
+ 4299
+ 312
+ 337
+ 1
+ 0
+ 23
+ 24
+ 0
+ 26
+ QFRNCMLTTLCCGKNPLGDDEASTTA
+ QFRNCMLTTICCGKNPLGDDEASATV
+ QFRNCMLTT+CCGKNPLGDDEAS T
+
+
+
+
+
+
+ 0
+ 0
+ 40
+ 509838
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 13
+ Query_4
+ gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
+ 983
+
+
+
+
+ 0
+ 0
+ 29
+ 112346
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 14
+ Query_4
+ gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
+ 983
+
+
+
+
+ 0
+ 0
+ 29
+ 112346
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 15
+ Query_4
+ gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
+ 983
+
+
+
+
+ 0
+ 0
+ 29
+ 112346
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 16
+ Query_4
+ gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
+ 983
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 589.341
+ 1518
+ 0
+ 1
+ 978
+ 11
+ 336
+ 1
+ 0
+ 310
+ 322
+ 0
+ 326
+ VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT
+ VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T
+
+
+
+
+
+
+ 0
+ 0
+ 29
+ 112346
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 17
+ Query_5
+ gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 18
+ Query_5
+ gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 19
+ Query_5
+ gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
+ 1047
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 20
+ Query_5
+ gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
+ 1047
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 619.387
+ 1596
+ 0
+ 1
+ 1044
+ 1
+ 348
+ 1
+ 0
+ 325
+ 337
+ 0
+ 348
+ MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVXXXXXXXXXXXXXXXXXKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 30
+ 119944
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+ 21
+ Query_6
+ gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
+ 1344
+
+
+
+
+ 0
+ 0
+ 32
+ 155584
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 22
+ Query_6
+ gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
+ 1344
+
+
+
+
+ 0
+ 0
+ 32
+ 155584
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 23
+ Query_6
+ gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
+ 1344
+
+
+
+
+ 0
+ 0
+ 32
+ 155584
+ 0.041
+ 0.267
+ 0.14
+
+
+ No hits found
+
+
+ 24
+ Query_6
+ gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
+ 1344
+
+
+ 1
+ Subject_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ Subject_4
+ 348
+
+
+ 1
+ 532.717
+ 1371
+ 0
+ 23
+ 1021
+ 1
+ 333
+ 2
+ 0
+ 272
+ 307
+ 0
+ 333
+ MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKXXXXXXXXXXXXXXXXXXVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDG
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA
+ MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +++
+
+
+
+
+
+
+ 0
+ 0
+ 32
+ 155584
+ 0.041
+ 0.267
+ 0.14
+
+
+
+
+
+
diff -r b2795652d2b4 -r 5402f9b0d508 test-data/tblastn_four_human_vs_rhodopsin.html
--- a/test-data/tblastn_four_human_vs_rhodopsin.html Mon Nov 25 10:58:46 2013 -0500
+++ b/test-data/tblastn_four_human_vs_rhodopsin.html Thu Nov 28 08:50:15 2013 -0500
@@ -3,7 +3,7 @@
-TBLASTN 2.2.27+
+TBLASTN 2.2.28+
Query= sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44
diff -r b2795652d2b4 -r 5402f9b0d508 test-data/tblastn_four_human_vs_rhodopsin.xml
--- a/test-data/tblastn_four_human_vs_rhodopsin.xml Mon Nov 25 10:58:46 2013 -0500
+++ b/test-data/tblastn_four_human_vs_rhodopsin.xml Thu Nov 28 08:50:15 2013 -0500
@@ -2,7 +2,7 @@
tblastn
- TBLASTN 2.2.27+
+ TBLASTN 2.2.28+
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query_1
@@ -17,706 +17,725 @@
F
-
-
- 1
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 2
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 3
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 4
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 5
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 6
- Query_1
- sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
- 406
-
-
-
- 0
- 0
- 19
- 127710
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 7
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 8
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 9
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 10
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 11
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 12
- Query_2
- sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
- 1161
-
-
-
- 0
- 0
- 23
- 370988
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 13
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 14
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 15
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 16
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 17
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 18
- Query_3
- sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
- 1382
-
-
-
- 0
- 0
- 24
- 441350
- 0.071
- 0.299
- 0.27
-
-
- No hits found
-
-
- 19
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_1
- gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
- Subject_1
- 1047
-
-
- 1
- 732.393
- 1689
- 0
- 1
- 348
- 1
- 1044
- 0
- 1
- 336
- 343
- 0
- 348
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
- 20
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_2
- gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
- Subject_2
- 1574
-
-
- 1
- 646.12
- 1489
- 0
- 1
- 341
- 42
- 1067
- 0
- 3
- 290
- 320
- 1
- 342
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE
- MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE
- MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
- 21
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_3
- gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
- Subject_3
- 4301
-
-
- 1
- 151.343
- 342
- 1.39567e-72
- 239
- 312
- 3147
- 3368
- 0
- 3
- 69
- 73
- 0
- 74
- ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ
- ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ
- ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ
-
-
- 2
- 126.324
- 284
- 1.39567e-72
- 177
- 235
- 2855
- 3031
- 0
- 2
- 54
- 57
- 0
- 59
- RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA
- RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS
- RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +
-
-
- 3
- 229.42
- 523
- 9.34154e-67
- 11
- 121
- 1
- 333
- 0
- 1
- 107
- 109
- 0
- 111
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG
- VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG
- VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG
-
-
- 4
- 122.873
- 276
- 1.03783e-32
- 119
- 177
- 1404
- 1580
- 0
- 3
- 55
- 56
- 0
- 59
- LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR
- LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR
- L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR
-
-
- 5
- 57.7368
- 125
- 1.50808e-12
- 312
- 337
- 4222
- 4299
- 0
- 1
- 23
- 24
- 0
- 26
- QFRNCMLTTICCGKNPLGDDEASATV
- QFRNCMLTTLCCGKNPLGDDEASTTA
- QFRNCMLTT+CCGKNPLGDDEAS T
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
- 22
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_4
- gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
- Subject_4
- 983
-
-
- 1
- 658.198
- 1517
- 0
- 11
- 336
- 1
- 978
- 0
- 1
- 310
- 322
- 0
- 326
- VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT
- VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT
- VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
- 23
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_5
- gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
- Subject_5
- 1047
-
-
- 1
- 711.256
- 1640
- 0
- 1
- 348
- 1
- 1044
- 0
- 1
- 325
- 337
- 0
- 348
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
- MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
- MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
- 24
- Query_4
- sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
- 348
-
-
- 1
- Subject_6
- gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
- Subject_6
- 1344
-
-
- 1
- 626.708
- 1444
- 0
- 1
- 341
- 23
- 1048
- 0
- 2
- 281
- 311
- 1
- 342
- MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE
- MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE
- MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE
-
-
-
-
-
-
- 0
- 0
- 18
- 109230
- 0.071
- 0.299
- 0.27
-
-
-
-
-
\ No newline at end of file
+
+
+ 1
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 2
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 3
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 4
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 5
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 6
+ Query_1
+ sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
+ 406
+
+
+
+
+ 0
+ 0
+ 19
+ 127710
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 7
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 8
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 9
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 10
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 11
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 12
+ Query_2
+ sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
+ 1161
+
+
+
+
+ 0
+ 0
+ 23
+ 370988
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 13
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 14
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 15
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 16
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 17
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 18
+ Query_3
+ sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
+ 1382
+
+
+
+
+ 0
+ 0
+ 24
+ 441350
+ 0.071
+ 0.299
+ 0.27
+
+
+ No hits found
+
+
+ 19
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_1
+ gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
+ Subject_1
+ 1047
+
+
+ 1
+ 732.393
+ 1689
+ 0
+ 1
+ 348
+ 1
+ 1044
+ 0
+ 1
+ 336
+ 343
+ 0
+ 348
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+ 20
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_2
+ gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
+ Subject_2
+ 1574
+
+
+ 1
+ 646.12
+ 1489
+ 0
+ 1
+ 341
+ 42
+ 1067
+ 0
+ 3
+ 290
+ 320
+ 1
+ 342
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE
+ MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE
+ MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S+ GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF+ QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+ 21
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_3
+ gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
+ Subject_3
+ 4301
+
+
+ 1
+ 151.343
+ 342
+ 1.39567e-72
+ 239
+ 312
+ 3147
+ 3368
+ 0
+ 3
+ 69
+ 73
+ 0
+ 74
+ ESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQ
+ ESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQ
+ ESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQ
+
+
+ 2
+ 126.324
+ 284
+ 1.39567e-72
+ 177
+ 235
+ 2855
+ 3031
+ 0
+ 2
+ 54
+ 57
+ 0
+ 59
+ RYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAA
+ RYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEVRS
+ RYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKE +
+
+
+ 3
+ 229.42
+ 523
+ 9.34154e-67
+ 11
+ 121
+ 1
+ 333
+ 0
+ 1
+ 107
+ 109
+ 0
+ 111
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGG
+ VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGG
+ VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGG
+
+
+ 4
+ 122.873
+ 276
+ 1.03783e-32
+ 119
+ 177
+ 1404
+ 1580
+ 0
+ 3
+ 55
+ 56
+ 0
+ 59
+ LGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSR
+ LAGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSR
+ L GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSR
+
+
+ 5
+ 57.7368
+ 125
+ 1.50808e-12
+ 312
+ 337
+ 4222
+ 4299
+ 0
+ 1
+ 23
+ 24
+ 0
+ 26
+ QFRNCMLTTICCGKNPLGDDEASATV
+ QFRNCMLTTLCCGKNPLGDDEASTTA
+ QFRNCMLTT+CCGKNPLGDDEAS T
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+ 22
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_4
+ gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
+ Subject_4
+ 983
+
+
+ 1
+ 658.198
+ 1517
+ 0
+ 11
+ 336
+ 1
+ 978
+ 0
+ 1
+ 310
+ 322
+ 0
+ 326
+ VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASAT
+ VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT
+ VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+ 23
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_5
+ gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
+ Subject_5
+ 1047
+
+
+ 1
+ 711.256
+ 1640
+ 0
+ 1
+ 348
+ 1
+ 1044
+ 0
+ 1
+ 325
+ 337
+ 0
+ 348
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA
+ MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA
+ MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+ 24
+ Query_4
+ sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
+ 348
+
+
+ 1
+ Subject_6
+ gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
+ Subject_6
+ 1344
+
+
+ 1
+ 626.708
+ 1444
+ 0
+ 1
+ 341
+ 23
+ 1048
+ 0
+ 2
+ 281
+ 311
+ 1
+ 342
+ MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE
+ MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE
+ MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR CM+TT+CCGKNP +D ASAT SKTE
+
+
+
+
+
+
+ 0
+ 0
+ 18
+ 109230
+ 0.071
+ 0.299
+ 0.27
+
+
+
+
+
+
diff -r b2795652d2b4 -r 5402f9b0d508 tools/ncbi_blast_plus/README.rst
--- a/tools/ncbi_blast_plus/README.rst Mon Nov 25 10:58:46 2013 -0500
+++ b/tools/ncbi_blast_plus/README.rst Thu Nov 28 08:50:15 2013 -0500
@@ -5,7 +5,7 @@
(formerly SCRI, Scottish Crop Research Institute), UK. All rights reserved.
See the licence text below.
-Currently tested with NCBI BLAST 2.2.27+ (i.e. version 2.2.27 of BLAST+),
+Currently tested with NCBI BLAST 2.2.28+ (i.e. version 2.2.28 of BLAST+),
and does not work with the NCBI 'legacy' BLAST suite (e.g. blastall).
Note that these wrappers (and the associated datatypes) were originally
@@ -71,7 +71,7 @@
about any system level BLAST databases using the tool-data/blastdb*.loc files.
You must install the NCBI BLAST+ standalone tools somewhere on the system
-path. Currently the unit tests are written using "BLAST 2.2.27+".
+path. Currently the unit tests are written using "BLAST 2.2.28+".
Run the functional tests (adjusting the section identifier to match your
tool_conf.xml.sample file)::
@@ -131,6 +131,9 @@
- Set number of threads via $GALAXY_SLOTS environment variable
- More descriptive default output names
- Tests require updated BLAST DB definitions (blast_datatypes v0.0.18)
+ - Pre-check for duplicate identifiers in makeblastdb wrapper.
+ - Tests updated for BLAST+ 2.2.28 instead of BLAST+ 2.2.27
+ - Now depends on package_blast_plus_2_2_28 in ToolShed
======= ======================================================================
diff -r b2795652d2b4 -r 5402f9b0d508 tools/ncbi_blast_plus/check_no_duplicates.py
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tools/ncbi_blast_plus/check_no_duplicates.py Thu Nov 28 08:50:15 2013 -0500
@@ -0,0 +1,46 @@
+#!/usr/bin/env python
+"""Check for duplicate sequence identifiers in FASTA files.
+
+This is run as a pre-check before makeblastdb, in order to avoid
+a regression bug in BLAST+ 2.2.28 which fails to catch this. See:
+http://blastedbio.blogspot.co.uk/2012/10/my-ids-not-good-enough-for-ncbi-blast.html
+
+This script takes one or more FASTA filenames as input, and
+will return a non-zero error if any duplicate identifiers
+are found.
+"""
+import sys
+import os
+
+if "-v" in sys.argv or "--version" in sys.argv:
+ print("v0.0.22")
+ sys.exit(0)
+
+def stop_err(msg, error=1):
+ sys.stderr.write("%s\n" % msg)
+ sys.exit(error)
+
+
+identifiers = set()
+files = 0
+for filename in sys.argv[1:]:
+ if not os.path.isfile(filename):
+ stop_err("Missing FASTA file %r" % filename, 2)
+ files += 1
+ handle = open(filename)
+ for line in handle:
+ if line.startswith(">"):
+ #The split will also take care of the new line character,
+ #e.g. ">test\n" and ">test description here\n" both give "test"
+ seq_id = line[1:].split(None, 1)[0]
+ if seq_id in identifiers:
+ handle.close()
+ stop_err("Repeated identifiers, e.g. %r" % seq_id, 1)
+ identifiers.add(seq_id)
+ handle.close()
+if not files:
+ stop_err("No FASTA files given to check for duplicates", 3)
+elif files == 1:
+ print("%i sequences" % len(identifiers))
+else:
+ print("%i sequences in %i FASTA files" % (len(identifiers), files))
diff -r b2795652d2b4 -r 5402f9b0d508 tools/ncbi_blast_plus/ncbi_macros.xml
--- a/tools/ncbi_blast_plus/ncbi_macros.xml Mon Nov 25 10:58:46 2013 -0500
+++ b/tools/ncbi_blast_plus/ncbi_macros.xml Thu Nov 28 08:50:15 2013 -0500
@@ -240,7 +240,7 @@
@BINARY@
- blast+
+ blast+
@BINARY@ -version
diff -r b2795652d2b4 -r 5402f9b0d508 tools/ncbi_blast_plus/ncbi_makeblastdb.xml
--- a/tools/ncbi_blast_plus/ncbi_makeblastdb.xml Mon Nov 25 10:58:46 2013 -0500
+++ b/tools/ncbi_blast_plus/ncbi_makeblastdb.xml Thu Nov 28 08:50:15 2013 -0500
@@ -5,7 +5,13 @@
ncbi_macros.xml
-
+ check_no_duplicates.py
+##First check for duplicates (since BLAST+ 2.2.28 fails to do so)
+##and abort (via the ampersand ampersand trick) if any are found.
+#for $i in $in
+"${i.file}"
+#end for
+&&
makeblastdb -out "${os.path.join($outfile.extra_files_path,'blastdb')}"
$parse_seqids
$hash_index