Mercurial > repos > peterjc > ncbi_blast_plus
comparison tool-data/blastdb.loc.sample @ 9:b2eb4f48122f draft
Uploaded v0.0.19, adding FTP URLs to docs
| author | peterjc |
|---|---|
| date | Thu, 25 Apr 2013 09:36:38 -0400 |
| parents | 4afb12181d1a |
| children |
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| 8:e710b9446493 | 9:b2eb4f48122f |
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| 28 #nt_02_Dec_2009 nt 02 Dec 2009 /depot/data2/galaxy/blastdb/nt/nt.chunk | 28 #nt_02_Dec_2009 nt 02 Dec 2009 /depot/data2/galaxy/blastdb/nt/nt.chunk |
| 29 #wgs_30_Nov_2009 wgs 30 Nov 2009 /depot/data2/galaxy/blastdb/wgs/wgs.chunk | 29 #wgs_30_Nov_2009 wgs 30 Nov 2009 /depot/data2/galaxy/blastdb/wgs/wgs.chunk |
| 30 #test_20_Sep_2008 test 20 Sep 2008 /depot/data2/galaxy/blastdb/test/test | 30 #test_20_Sep_2008 test 20 Sep 2008 /depot/data2/galaxy/blastdb/test/test |
| 31 #...etc... | 31 #...etc... |
| 32 # | 32 # |
| 33 #You can download the NCBI provided protein databases like NT from here: | |
| 34 #ftp://ftp.ncbi.nlm.nih.gov/blast/db/ | |
| 35 # | |
| 33 #See also blastdb_p.loc which is for any protein BLAST database, and | 36 #See also blastdb_p.loc which is for any protein BLAST database, and |
| 34 #blastdb_d.loc which is for any protein domains databases (like CDD). | 37 #blastdb_d.loc which is for any protein domains databases (like CDD). |
| 35 # | 38 |
| 36 #Note that for backwards compatibility with workflows, the unique ID of | 39 |
| 37 #an entry must be the path that was in the original loc file, because that | |
| 38 #is the value stored in the workflow for that parameter. | |
| 39 # |
