Mercurial > repos > peterjc > ncbi_blast_plus

annotate test-data/rhodopsin_nucs.fasta @ 41:af4da561893b draft

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Uploaded v0.1.0 preview 4, adding taxonomy columns etc
author peterjc
date Wed, 26 Feb 2014 13:26:14 -0500
parents b04f55ab182c
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
1 >gi|57163782|ref|NM_001009242.1| Felis catus rhodopsin (RHO), mRNA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
2 ATGAACGGGACGGAGGGCCCGAACTTCTACGTGCCCTTCTCCAACAAAACGGGTGTGGTACGCAGCCCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
3 TCGAGTACCCACAGTACTACCTGGCTGAGCCATGGCAGTTCTCCATGCTGGCCGCCTACATGTTCCTGCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
4 CATCGTGCTTGGCTTCCCCATCAACTTCCTCACGCTCTACGTCACGGTCCAGCACAAGAAGCTGCGCACG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
5 CCTCTCAACTACATCCTGCTCAACCTGGCCGTGGCTGACCTCTTCATGGTCTTCGGTGGCTTCACCACCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
6 CCCTCTACACCTCTCTGCATGGATACTTTGTCTTTGGGCCCACAGGATGCAATTTGGAGGGCTTCTTTGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
7 CACACTGGGCGGTGAAATTGCCCTGTGGTCTTTGGTGGTCCTGGCCATTGAGCGGTACGTGGTGGTGTGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
8 AAGCCCATGAGCAACTTCCGCTTTGGGGAGAACCATGCCATAATGGGCGTCGCTTTCACCTGGGTCATGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
9 CACTGGCCTGCGCTGCACCCCCCCTCGTTGGTTGGTCCAGGTACATCCCTGAAGGCATGCAGTGTTCATG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
10 CGGGATCGACTACTACACACTCAAGCCAGAAGTCAACAACGAGTCCTTTGTCATCTACATGTTCGTGGTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
11 CACTTCACCATCCCCATGATCGTCATCTTCTTTTGCTACGGGCAGCTTGTCTTCACAGTCAAGGAGGCGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
12 CAGCCCAGCAGCAGGAGTCAGCCACCACCCAGAAGGCTGAGAAGGAGGTCACTCGCATGGTCATCATCAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
13 GGTCATTGCTTTCCTGATCTGTTGGGTGCCCTACGCCAGCGTGGCATTCTACATCTTCACCCACCAGGGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
14 TCCAACTTTGGCCCCATCTTCATGACACTCCCGGCGTTCTTCGCAAAGTCCTCCTCCATCTACAACCCTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
15 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
16 ACTGGGTGATGACGAGGCTTCCACAACCGGTTCCAAGACGGAGACCAGCCAGGTGGCACCGGCCTAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
17
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
18 >gi|2734705|gb|U59921.1|BBU59921 Bufo bufo rhodopsin mRNA, complete cds
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
19 TCTTTCTAGTTTGGGGGGGGGGACTTTAAAGAGCCGCCAATATGAACGGAACAGAAGGCCCAAACTTTTA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
20 CATACCCATGTCCAACAAGACTGGGGTGGTGCGAAGCCCCTTTGAATACCCTCAGTATTACCTGGCAGAG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
21 CCATGGCAATATTCCATTCTGTGCGCGTACATGTTCCTGCTCATTCTACTTGGGTTCCCAATCAACTTCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
22 TGACCTTGTACGTCACCATCCAGCACAAGAAGCTCCGGACACCCTTAAACTATATCCTGCTGAATTTGGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
23 CTTTGCCAACCACTTCATGGTCCTGTGTGGATTCACGGTGACAATGTACTCCTCAATGAACGGATACTTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
24 ATCCTCGGAGCCACCGGTTGCTATGTTGAAGGCTTCTTCGCTACCCTTGGTGGTGAAATCGCCCTTTGGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
25 CCCTGGTGGTCTTGGCCATTGAACGATACGTGGTCGTCTGTAAGCCCATGAGCAACTTCCGATTTAGTGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
26 GAACCATGCCGTCATGGGCGTAGCGTTCACCTGGATAATGGCTTTGTCCTGTGCTGTTCCTCCACTCCTT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
27 GGATGGTCCAGGTACATCCCCGAGGGCATGCAGTGCTCCTGCGGAGTCGACTACTACACCCTGAAGCCCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
28 AGGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTCGTCCACTTCACCATCCCCCTGATTATCATTTT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
29 CTTCTGCTATGGCCGCCTGGTGTGCACTGTGAAAGAGGCTGCAGCTCAACAGCAAGAGTCCGCCACCACC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
30 CAGAAGGCCGAGAAAGAGGTGACCAGGATGGTGATCATCATGGTGGTCTTCTTCCTTATCTGTTGGGTCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
31 CCTACGCCTCTGTCGCTTTCTTCATCTTCAGCAATCAGGGCTCTGAGTTCGGCCCCATCTTCATGACCGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
32 CCCAGCTTTCTTTGCCAAGAGTTCTTCCATCTACAACCCCGTCATCTACATCATGCTCAACAAGCAGTTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
33 CGTAACTGCATGATCACCACCCTGTGCTGCGGCAAGAATCCCTTTGGAGAAGACGATGCCTCCTCTGCCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
34 CCACCTCCAAGACAGAGGCTTCTTCTGTTTCTTCCAGCCAGGTGTCTCCTGCATAAGACCTTCCACCAGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
35 CCTGTCTCAGGGTCCGCTGCCTCACACAGCTCCCACCGCCCCAACTCCGTCTCCTGCTCGCTAAGGCGGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
36 GAAGTTCCCCTTCCATTACATAAAACGTATCTGTTCAAGAAAGGCGACGACGAAGGAGAAGAAGAGGAGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
37 CCCCCCGAACCCCTTCGCTGCTGCTGAAAACGACTTGATTGCTTCTGCAACGCAACGGGGCCTTACGGCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
38 GCGAAGGGGTTGTCATCCGGACGCGCCAAGAATTCCTTCGAGACTGTAAATATCTTAAAGGAACCGTCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
39 GCTAGTTACCGACGCCGCTCCTGTAGCCGCCGTTCCCCCGCACTCCGGCCGGTTCATACCTCTTATTTTT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
40 TTGCAATGCAACAGAAAATAATATTTTTGTTCCCACGGCTTTTCCCGGTCAGGTCTGGTAGTGGCGGAGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
41 TTGGCCGACCCCTCGCACCTGTAATAAAGCGCAG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
42
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
43 >gi|283855845|gb|GQ290303.1| Cynopterus brachyotis voucher 20020434 rhodopsin (RHO) gene, exons 1 through 5 and partial cds
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
44 GTGCCCTTCTCCAACAAGACAGGCGTGGTGCGCAGTCCCTTCGAGCATCCACAGTACTACCTGGCCGAGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
45 CATGGCAGTTCTCCATGCTGGCCGCCTACATGTTTCTGCTGATCGTGCTCGGCTTCCCCATCAACTTCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
46 CACGCTCTATGTCACGGTTCAGCACAAGAAGCTGCGTACGCCTCTCAACTACATCCTGCTCAACCTGGCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
47 GTGGCCGACCTCTTCATGGTCTTCGGAGGCTTCACCACCACCCTCTACACCTCCCTGCATGGATACTTTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
48 TCTTCGGGCCTACGGGATGCAATCTGGAGGGCTTTTTTGCCACCCTGGGAGGTATGAGCTGAGATGCGGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
49 TAAGGAGGAGGCATAGAGGCATCTGGGAACAGTCCCAAGCTTGGGGTGAAGGCTAAGAGGCCTTCTTCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
50 TGTTCTGTCATTGGCGTCGTCCGAAGCCCTCACTTAATCAACAAACAGTTTGGTGGTGAGGCGCTGAGCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
51 CCATTTGGAGAGGGCAGGTATCGAGCACTGTTTTATCCCCCCTGGAGTGGTGCCATTGCCTTGCTTTACA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
52 GCAAAGAAACTGAGGATGAGAGGAGTCGAGGGTCTTGCCAGGTCACATCATGGCAGAGACAGAGCTGAGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
53 TTCAACCCTGCATCTATGTGCAGTTTCCCTTGGAGCAGCTATGTTAGGTCAGACCCACGGTGGGCACTGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
54 GGAGAGAGCTGCACAAGACAGGTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
55 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTGATTGCCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
56 GGAGTGATGTGCAGCGCAAATGTCTGAATTCCATTATTATGTGCTCCTTCTTCCTCTGAGCCAAACATCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
57 ATCTTCATGGCTCCTAGAATTGGGTCCCACCCACATGAGCAGGTCATTTTGTTTCCCTAGAGGGGAGAGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
58 TCACTGCTGTGGAGGGAGGGAAGGTTCGTCCCGCTCCATGTTTCTGTTGTCTCTGCAATGCCTTTCTCTA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
59 GGGACTCTGCCTATTGCCCCAAGAAGGACACATTCTTCTGTAAAAACTCCCTCCTGGGTTCCCAGTCTAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
60 TCAAGACCTCTAAACTGATTTCCATGTCCCTCATGAACCCAAAGCTCTAACTGAATTAAACTTCTCAGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
61 CTTACTCCACTCTCCTCGTCCATCATGCAGCCCCTCTGCCCAGCACCCTATCTCCTCTTCTTCCCAGTGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
62 CTGAGCCCACTGTACCCTGAGACTTCGCTCCAGGCCTGCCCCAGGCTGCCTTCTCAGGTGCCCTCTCCCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
63 CATAGGAGGAGCACGGCCTCCTTAGACAGACGTGGGGTGCAGGTTGGTGGCATGCTGACTGATAGCTGAC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
64 TGCCTTGCAGGTGAAATTGCCCTGTGGTCCTTGGTGGTCCTGGCCATCGAGCGGTACGTGGTGGTATGCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
65 AGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCCTTGCCCTCACCTGGGTCATGGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
66 ACTGGCCTGCGCCGCGCCCCCGCTAGTCGGCTGGTCCAGGTAATGGCACTGAACAGAAGGGAAGTGCCTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
67 TGAGGTCTTCTTAGGGTCCCCCAGCTGGGACTCAAACCTAGGGCTGTCTGGTTCCAGGCACGGAACTGGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
68 GACTCCACTGGGGTTGGGGTTTAGGGCAAGGAAGGAGAGGATCAGACCCTAATGTTGTTACGTGGGTTGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
69 TCCGCATGTCAAGGAGAATCCAAGACACCCAATCCTTCACCTTGGCTGTGCCCCTAATCCTCATCTAAGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
70 CAGGTTCAGATTCCAATCCTCTTTGGCCCAGTGCTCCGTGGGAAGCTCCCTCTGACCTTGGGCCTCAGCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
71 CCTGGGGTTGCTGAGCCTTCCTAGTATAGGTGGTGACATCGTAGCCCCTGGGACCTGGATCCTGCCCAGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
72 CTGCAGGCCATCATCTCCAAATGGGGCTGAGATGAGATGTGAGGAAAGAGGGGAGACAGTGGTTTGGAAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
73 ACTGGACTGGTGGCTTTTTTGGGTTTCCAGAGGACTCATCTTCCTCTGCTTCTAGAATATTCCCACTCTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
74 TCTTCCCTTTCCTCATTCTTCCTGGGTTATTTTTTTTTCCCTTTGCTGAATTCGAGCCCCATTCCCTCCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
75 GCCTCTTTCCCTGTCTTATCTAGCCCAGTCCAGTTATATTCTCATAGGCAGAGGCAACAGATGCTCCAAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
76 TTTTCTGAGGTCGGTTCCAACATCGCCACCCTCTAAAATCAGTGAAACATCCTAACTACATGCCTCATAG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
77 TCCTCCTGTTTCCAAAAACTGCAAAGATCTCCTGGTTACCCTGTATGCCCATCTTTGGGCTAGAAAATCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
78 TCTCACCCTGTTAATAGTAAGACCCTGGTTTGTACAAACTGCCTCAAACACAGAGTTTAGGGGCTTTTCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
79 CTTCTCTCCGCCAACCTCTGACAGGCAGAGTCTGAGGCCTGGCCTCCAGCTGCTGCGGGGAGCAGGTCTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
80 GTAAAGAATCCTGTGCAGGTCAGTGGTATACAGGTCCTGTCAGGTGACAGCCTGGGCGAGAGACTGGAAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
81 GTATCAGGATAACACGGCTGCCAGACGAACAACAAAACAACACTGAATTCACAAGGCGCATTCGAATCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
82 CTCTCAGTCCATTTGATCCTCAGTCACACAGCCGAGTAGACACTTTATCAACTCATTTAACAGAAAGGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
83 AAGTGAAGCCCAGAGCGAGGCCAGCAACGTGGCAGGTCACTCTGGTCATCTAGGGCCTGTTCCCAACTCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
84 TTCACATGTGGGTCTCCAATATGTTCCCTCCTGTCCCAATCTCTGCCGGCCCTCAGGTACATCCCAGAGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
85 GCATGCAGTGCTCATGTGGAATCGACTACTACACCCTCAAGCCGGAGGTCAACAACGAGTCCTTTGTCAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
86 CTACATGTTCGTGGTCCACTTCACCATCCCTATGATTGTCATATTCTTTTGCTATGGACAGCTGGTCTTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
87 ACCGTCAAGGAGGTAAGGTCATGTGTTGGGCACTGGGGACATGCACACTGAGTGAATGGAGCCCAGCTCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
88 ATTCCCAGAGTTGCCACAGTCTGGACACCTGACCTTGTGTCCCTGCAGGCAGCTGCCCAGCAGCAGGAGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
89 CAGCCACCACCCAGAAGGCCGAGAAGGAGGTCACCCGTATGGTCATCATCATGGTCATTGCTTTCCTAAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
90 CTGTTGGCTGCCGTATGCCGGCGTGGCATTCTACATCTTCACCCACCAGGGCTCTAACTTTGGCCCCATC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
91 TTCATGACCCTCCCGGCATTCTTTGCCAAGTCGTCCTCCATCTACAACCCTGTCATCTATATCATGATGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
92 ACAAGCAGGTGCCAGGTGGTAGGGAGGGAGGGTCTGGGTCCCCCAGGCTGCAGGCACTGCCCACAGAGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
93 CAAGCCACATCCTTGACTAGGCAGACCCCAGTCTTCCCATCTGCAAAATTAGGCAGGGGAGTTCGTCTCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
94 CCCAGGCATCAGAGACATCGGGGAGAAATGCACATTTCTGGAGATGAATCAGCATCTCAGGGTGGGCCCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
95 GGAACCTGCACTTCTAAAAACCATTCCACATGACTCTGAGGCTAGCATGAGAAGTGATGATCCACATGGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
96 TCTGGAGGCCTGCTTTAAAAGTCAAGTGGTCAAAGTCCCAAGCCTGGGAACGGGATGGTGCCAGTCTCCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
97 TTAAAGAGATCAAAAGGAGCTAGAAAGTCTTGTGATGAAAGATGAAGGGATAAAGCCGTCCTTTAACACA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
98 GATCAGTGATTTCTCTGCAGAATCCATGACCCAGTGGGAAAAAGTGGTCCCTGGAGTCAGGCATATTGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
99 TTCAAATCCTAGCTCTGCTATTTTCTAGCTATGTAACCTTGGGCAAGTCATCTCCCTTCTCTGTGCTTCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
100 GTTTCTTCTTTCATAGAAAGGGTAAAATCCCAAACTCTTGGGTTAAATGAGATAACTTACATAGCCCTTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
101 ATATGCAGAGGCATTATGGAATGTCGTTAGTGACAAAGTTCCCTTGGGTTTGGTCCCTGGTATCTCTGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
102 GTGAGATTGCATATGTTCCCTTCAGAGGGTCAGATTTGGGATGAGAGTGGAGGCTGCGAGGGCCTGAGTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
103 GGAAGGGATTGGAGGCAAATCTCACCAACCATGTCAGTTTGCTACACACACTTTGGGTGGACCCTGACCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
104 TGACTCATGCTTCTTGCCTTCCAGTTCCGGAACTGCATGCTCACTACCCTCTGCTGTGGCAAGAACCCAC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
105 TGGGTGACGATGAGGCCTCCACCACTGCCTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
106
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
107 >gi|283855822|gb|GQ290312.1| Myotis ricketti voucher GQX10 rhodopsin (RHO) mRNA, partial cds
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
108 GTGCCCTTCTCCAACAAGACGGGTGTGGTGCGCAGCCCCTTCGAGTACCCGCAGTACTACCTGGCTGAGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
109 CCTGGCAGTTCTCCATGCTGGCTGCCTACATGTTTCTGCTGATCGTGCTCGGATTCCCCATCAACTTCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
110 CACGCTCTACGTCACCGTCCAGCACAAGAAGCTGCGCACGCCTCTCAACTACATCCTGCTCAACCTGGCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
111 GTGGCCAACCTCTTCATGGTCTTTGGAGGCTTCACCACCACCCTGTATACCTCTATGCATGGATACTTCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
112 TCTTCGGGGCCACGGGATGCAATCTGGAGGGCTTCTTTGCCACGCTGGGCGGTGAAATCGCCCTGTGGTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
113 CCTGGTGGTCCTGGCCATCGAGCGGTATGTGGTGGTCTGCAAGCCCATGAGCAACTTCCGCTTTGGGGAG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
114 AACCACGCCATCATGGGCCTCGCCTTCACGTGGGTCATGGCACTGGCCTGCGCTGCACCCCCACTAGCCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
115 GCTGGTCCAGGTACATCCCAGAGGGCATGCAGTGCTCGTGTGGGATTGACTACTACACGCTCAAACCGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
116 GGTCAACAACGAGTCCTTCGTCATCTACATGTTCGTGGTCCACTTCACCATCCCCATGATTGTCATTTTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
117 TTCTGCTACGGACAGCTGGTGTTCACAGTGAAGGAGGCGGCTGCCCAGCAGCAGGAGTCAGCCACCACCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
118 AGAAGGCCGAGAAGGAAGTCACGCGCATGGTCATCATCATGGTCGTTGCGTTCCTAATCTGTTGGCTGCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
119 CTACGCCAGCGTGGCATTCTACATCTTTACCCACCAGGGCTCTAACTTTGGCCCTGTCTTCATGACCATC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
120 CCGGCATTCTTCGCCAAGTCATCCTCCATCTACAACCCGGTCATCTATATCATGATGAACAAGCAGTTCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
121 GGAACTGCATGCTCACCACCCTCTGCTGTGGCAAGAACCCACTGGGTGATGACGAAGCATCCACCACTGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
122 CTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
123
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
124 >gi|18148870|dbj|AB062417.1| Synthetic construct Bos taurus gene for rhodopsin, complete cds
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
125 ATGAACGGGACCGAGGGCCCAAACTTCTACGTGCCTTTCTCCAACAAGACGGGCGTCGTACGCAGCCCCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
126 TCGAGGCGCCGCAGTACTACCTGGCTGAGCCATGGCAGTTCAGCATGCTGGCCGCCTACATGTTCCTGCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
127 GATCATGCTTGGCTTCCCCATCAACTTCCTCACGCTGTACGTCACAGTCCAGCACAAGAAGCTGAGGACC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
128 CCCCTCAACTACATCCTGCTCAACCTGGCCGTGGCAGATCTCTTCATGGTGTTCGGGGGCTTCACCACCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
129 CCCTGTATACCTCTCTGCACGGGTACTTCGTGTTCGGTCCGACGGGCTGCAACCTCGAGGGCTTCTTTGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
130 CACCTTAGGCGGTGAAATTGCACTGTGGTCCTTGGTGGTGCTAGCCATCGAGCGGTACGTAGTGGTGTGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
131 AAGCCCATGAGCAACTTCCGCTTCGGGGAGAACCACGCCATCATGGGCGTCGCATTCACCTGGGTCATGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
132 CTCTGGCCTGTGCGGCCCCCCCCCTCGTCGGCTGGTCTAGATACATCCCGGAGGGGATGCAGTGCTCGTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
133 CGGGATCGATTACTACACGCCCCACGAGGAGACCAACAATGAGTCGTTCGTCATCTACATGTTCGTTGTA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
134 CACTTCATCATCCCCCTGATTGTCATATTCTTCTGCTACGGGCAGCTGGTCTTCACCGTCAAGGAGGCTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
135 CAGCCCAGCAGCAGGAGTCGGCCACCACTCAGAAGGCCGAGAAGGAGGTCACGCGTATGGTCATCATCAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
136 GGTCATCGCTTTCCTCATATGCTGGCTGCCCTACGCAGGTGTGGCGTTCTACATCTTCACCCATCAGGGA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
137 TCCGACTTTGGCCCCATCTTCATGACCATCCCGGCTTTCTTTGCCAAGACGTCTGCCGTCTATAACCCCG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
138 TCATCTACATCATGATGAACAAGCAGTTCCGGAACTGCATGGTCACCACTCTCTGCTGTGGCAAGAACCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
139 CCTAGGTGACGACGAGGCCTCCACGACCGTGTCCAAGACAGAGACCAGCCAAGTGGCCCCTGCCTAA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
140
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
141 >gi|12583664|dbj|AB043817.1| Conger myriaster conf gene for fresh water form rod opsin, complete cds
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
142 CCGCTACTGACGAACCGCAACCATGAACGGCACTGAGGGACCTAACTTCTACATCCCCATGTCAAACGCC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
143 ACTGGTGTAGTGAGGAGTCCATTTGAATACCCGCAGTACTACCTTGCAGAACCATGGGCTTTCTCAGCTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
144 TGTCTGCCTACATGTTCTTCCTGATTATCGCCGGATTCCCCATCAACTTCCTCACCCTGTATGTCACCAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
145 CGAACATAAGAAACTGAGGACCCCACTGAACTACATTCTGCTGAACCTGGCCGTGGCCGACCTCTTCATG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
146 GTGTTTGGCGGATTCACCACCACGATGTACACCTCCATGCACGGCTACTTTGTCTTCGGCCCCACCGGCT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
147 GCAACATCGAAGGGTTCTTCGCCACCCTCGGCGGCGAGATTGCCCTCTGGTGCCTCGTTGTCCTGGCCAT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
148 TGAAAGGTGGATGGTCGTCTGCAAGCCAGTGACCAATTTCCGCTTCGGTGAGAGCCATGCCATCATGGGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
149 GTCATGGTGACCTGGACCATGGCATTGGCCTGTGCCCTCCCCCCTCTCTTCGGCTGGTCTCGGTACATTC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
150 CGGAAGGTCTGCAGTGCTCGTGCGGGATCGACTACTATACCCGGGCGCCTGGGATCAACAATGAGTCCTT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
151 TGTGATCTACATGTTTACCTGCCACTTCTCCATCCCACTCGCCGTCATCTCTTTCTGCTACGGCCGACTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
152 GTGTGCACCGTCAAAGAGGCCGCTGCCCAGCAACAGGAGTCCGAGACCACCCAGAGGGCTGAGCGGGAGG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
153 TCACCCGCATGGTCGTCATCATGGTCATCTCCTTCCTGGTCTGCTGGGTGCCCTATGCCAGTGTGGCCTG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
154 GTACATCTTTACCCACCAGGGAAGCACTTTTGGGCCCATCTTCATGACCATTCCATCCTTCTTTGCCAAG
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
155 AGTTCAGCCCTCTACAACCCCATGATCTACATCTGCATGAACAAGCAGTTCCGCCATTGCATGATCACCA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
156 CCCTCTGCTGTGGGAAGAACCCCTTCGAGGAGGAGGATGGAGCGTCCGCCACTAGCTCTAAAACTGAGGC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
157 TTCATCCGTGTCCTCCAGCTCTGTCTCCCCGGCATAAACCTTGTTTGACCGAACACCACGCATCAACACA
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
158 AAGACCAAGAATGCTGACTAAATGCTAACATTTCAGGGAAATCCAAAGACTTTTTACTATTTTTTTACAC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
159 AACCATATAGGTTGCAAACAGAGGTTTAGCCCTGTTTACAGGTTGTCATCAATGTGATGTCAGTATGTAC
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
160 AATATAGTCAACTTGATAGCAAGTTGTTGGCTTATTTCAGATTGTATGGGCAATGTAATCAACCATATGT
b04f55ab182c Uploaded v0.0.12
peterjc
parents:
diff changeset
161 GAAATAAATTGCAA