Mercurial > repos > peterjc > mira4_assembler

view test-data/U13small_m.mira4_de_novo.fasta @ 21:4abe8d59a438 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.0.4 preview 1; fix getting BAM without MAF
author peterjc
date Tue, 28 Oct 2014 08:29:59 -0400
parents 5bbaa930d7fa
children
line wrap: on
line source

>MIRA_rep_c1
aaatttcataaaatttctcatttcaaaaacgagaaaattaaggccttgcggggttaaatc
gttatcaagtaatcagtcggctcactgcccagtgtggacactggccaatattatggcacc
agcctttgagaaaaggaaacctttttttgaatccatctccctgacctggggtttgggttg
ggttttatcagcatagggtgacaggcaagttcaatctgattggatcctggatcccatcat
ggggtatctgttcctaaatcattccctgatcctcggtcagagcgagcgcttaggttcccg
ctgcagttaaacacctggttcatctgggcatactaaggttatgactttccacctgggagt
ccacgacaactgaaaaaactcaaaacttctttaagtagaagttgagcctgaagctgaggc
agctgtttcagagaggaggaggaggaggagatagcaaatgtcaagggatttccatttctc
tttcaatgccaacatacttcagggcatcagcctggctgtatctgtaatcaaaaaacagtt
cttcgcaagtctggatggctctcctgacaaaaacacctatcctgtgatcaccattaacca
tcataacttttgcatagcagtttggatttaccgaatgatttgcaaaacgaattttgttac
ccttgcaggttgcatccaccacaaaatcattgttcaagttgaacagaaagctgcacatgt
atttatcacacactttccctcttccgtcagcttagcttcaggaacctcgagtactgtggg
caatttagaaaaagaaaatgccgtttgaaattctgaatttgcaaagtactataagaataa
tttatagcaatgagtttaaaactcaactttttattgccttctcaccagctgcaaagtgtt
ttgtaccagtgaatttttgcaataatgcagtatggtatatttttcaactttgaataaaga
atacttgaaattgaaaaaaaaaattgagtctgatgggtctagtgtgtttataaaatgact
taagatcccacagttattttaaagtaatacattactcaactggtattcattttgatgcca
ttattttattttataaaactagtcatccttgcagaagtgtatctgattaactcttgacaa
ctactttgcctattttattaacagctgcatttaacccacgtgacaggataactaatttct
attgtttttgtatttttgcctcctccttccaagatagcagtagagtactgtgttaaatct
tgcttcagaagagcttgtttaaaatagttataaagaaagtaaaatacatagaaaaacacg
ttataattttaaattaaaaaagaaaaaagatgtctactctgaataaattatgcatacata
taaggtctgaacaaaaacatgaaaagatgggctctgagtatcaattttaaaaatctttac
cagtataacattactcaaacaaaaattaaaatttaatataattaagtacatattccaaga
caacaaatggaccttgactgttaattctgg
>MIRA_rep_c2
gcaatatcgtgacgatatgtawgataaatacatgtgcagctytctgttcaacttgaacaa
tgattttgtggtggatgcaacccgcaagggtaacaaaattcgttttgcaaatcattcggt
aaatccaaactgctatgcaaaagttatgatggttaacggtgatcacaggatakgtatttt
tgccaagagagccatccagactggcgaaragctgttttttgattacagatacagccaggc
tgatgccctgaagtatgtcggcatcgaaagagaaatggaaatcccttgacatctgctacc
tcctccccctcctctgaaacagctgccttagcttcaggaacctcgagtactgtgggcaat
ttaaaaaaagaacatgcagtttgaaattctgaatttgcaaagtactgtaagaataattta
tagtaatgagtttaaaaatcaactttttattgccttctcaccagctgcaaagtgttttgt
wccagtgaattttgcaataatgcagtatggtacattttcactttgaataaagaatacttg
a
>MIRA_rep_c3
gcgttattaaagacttttttttwtttttttttcaagttcaagtattctttattcaaagtt
gaaaaatgtaccatactgcattattgcaaaaattcactggtacaaaacactttgcagctg
gtgagaaggcaataaaaagttgatttttaaactcattactataaattattcttacagtac
tttgcaaattcagaatttcaaactgcatgttctttttctaaattgcccacagtactcgag
gttcctgaagctaaggcagctgtttcagaggagggggargaagtaycaaatytcwaggga
tttccatttctctttccatgccgamatacttcagggcatcagcctgactgtmtctgtaat
caaaaaacakctcttcgccavtctggatggctctctyggcaaaaatacctatcctgtgat
caccgttaaccatcataacttttgcatagcattt