diff tools/mira4_0/mira4_de_novo.xml @ 36:46d73b942b43 draft

planemo upload for repository https://github.com/peterjc/galaxy_mira/tree/master/tools/mira4_0 commit 9526de68e38a82bb84b2d9267a8c290c6adcaa65

--- a/tools/mira4_0/mira4_de_novo.xml	Wed Aug 09 13:32:11 2017 -0400
+++ b/tools/mira4_0/mira4_de_novo.xml	Fri Sep 15 10:09:14 2017 -0400
@@ -38,7 +38,7 @@
 ## point to a local hard drive (not something like NFS on network).
 ## We replace /tmp with an environment variable via mira4.py
 ##
-## -OUT:orc=no is short for -OUTPUT:output_result_caf=no 
+## -OUT:orc=no is short for -OUTPUT:output_result_caf=no
 ## which turns off an output file we don't want anyway.
 
 #for $rg in $read_group
@@ -142,8 +142,8 @@
         <data name="out_maf" format="mira" label="MIRA de novo assembly">
             <filter>maf_wanted is True</filter>
         </data>
-        <!-- TODO?                                                                                                                          
-        <data name="out_contigstats" format="tabular" label="MIRA contig stats" />                                                          
+        <!-- TODO?
+        <data name="out_contigstats" format="tabular" label="MIRA contig stats" />
         -->
         <data name="out_log" format="txt" label="MIRA de novo log" />
     </outputs>