Mercurial > repos > peterjc > mira4_assembler

diff tools/mira4/README.rst @ 18:381aa262c8cb draft

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Uploaded v0.0.2 preview 10, override /tmp via environment variable
author peterjc
date Tue, 25 Mar 2014 07:37:50 -0400
parents 5bbaa930d7fa
children 8487d70e82aa
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--- a/tools/mira4/README.rst	Mon Mar 03 11:49:21 2014 -0500
+++ b/tools/mira4/README.rst	Tue Mar 25 07:37:50 2014 -0400
@@ -86,6 +86,10 @@
 v0.0.1  - Initial version (prototype for MIRA 4.0 RC4, based on wrapper for v3.4)
 v0.0.2  - Include BAM output (using ``miraconvert`` and ``samtools``).
         - Updated to target MIRA 4.0
+        - Simplified XML to apply input format to output data.
+        - Sets temporary folder at run time to respect environment variables
+          (``$TMPDIR``, ``$TEMP``, or ``$TMP`` in that order). This was
+          previously hard coded as ``/tmp``.
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