Mercurial > repos > peterjc > mira4_assembler

comparison tools/mira4/mira4_de_novo.xml @ 7:902f01c1084b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.0.1 preview 7, with mirabait wrapper
author peterjc
date Fri, 25 Oct 2013 07:18:38 -0400
parents 626d5cfd01aa
children 302d13490b23
comparison
equal deleted inserted replaced
6:626d5cfd01aa 7:902f01c1084b
45 help="Optional, but if used you must also supply a maximum value." /> 45 help="Optional, but if used you must also supply a maximum value." />
46 <param name="max_size" type="integer" optional="true" min="0" value="" 46 <param name="max_size" type="integer" optional="true" min="0" value=""
47 label="Maximum size of 'good' DNA templates in the library preparation" 47 label="Maximum size of 'good' DNA templates in the library preparation"
48 help="Optional, but if used you must also supply a minimum value." /> 48 help="Optional, but if used you must also supply a minimum value." />
49 <param name="naming" type="select" label="Pair naming convention"> 49 <param name="naming" type="select" label="Pair naming convention">
50 <option value="solexa">Solexa/Illumina (using '/1' and '/2' suffixes)</option> 50 <option value="solexa">Solexa/Illumina (using '/1' and '/2' suffixes, or later Illumina colon system)</option>
51 <option value="FR">Forward/Reverse scheme (using '.f*' and '.r*' suffixes)</option> 51 <option value="FR">Forward/Reverse scheme (using '.f*' and '.r*' suffixes)</option>
52 <option value="tigr">TIGR scheme (using 'TF*' and 'TR*' suffixes)</option> 52 <option value="tigr">TIGR scheme (using 'TF*' and 'TR*' suffixes)</option>
53 <option value="sanger">Sanger scheme (see notes)</option> 53 <option value="sanger">Sanger scheme (see notes)</option>
54 <option value="stlouis">St. Louis scheme (see notes)</option> 54 <option value="stlouis">St. Louis scheme (see notes)</option>
55 </param> 55 </param>