Mercurial > repos > peterjc > mira4_assembler
comparison tools/mira4/mira4_de_novo.xml @ 14:133b863a8a40 draft
Uploaded v0.0.2 preview 6, include some omitted test files.
| author | peterjc |
|---|---|
| date | Mon, 17 Feb 2014 06:12:41 -0500 |
| parents | 7fcabeeca5df |
| children | b0ffe0e7282b |
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| 13:7fcabeeca5df | 14:133b863a8a40 |
|---|---|
| 71 <code file="mira4_validator.py" /> | 71 <code file="mira4_validator.py" /> |
| 72 <outputs> | 72 <outputs> |
| 73 <data name="out_fasta" format="fasta" label="MIRA de novo contigs (FASTA)" /> | 73 <data name="out_fasta" format="fasta" label="MIRA de novo contigs (FASTA)" /> |
| 74 <data name="out_bam" format="bam" label="MIRA de novo assembly (BAM)" /> | 74 <data name="out_bam" format="bam" label="MIRA de novo assembly (BAM)" /> |
| 75 <data name="out_maf" format="mira" label="MIRA de novo assembly" /> | 75 <data name="out_maf" format="mira" label="MIRA de novo assembly" /> |
| 76 <!-- TODO? | |
| 77 <data name="out_contigstats" format="tabular" label="MIRA contig stats" /> | |
| 78 --> | |
| 76 <data name="out_log" format="txt" label="MIRA de novo log" /> | 79 <data name="out_log" format="txt" label="MIRA de novo log" /> |
| 77 </outputs> | 80 </outputs> |
| 78 <configfiles> | 81 <configfiles> |
| 79 <configfile name="manifest"> | 82 <configfile name="manifest"> |
| 80 project = MIRA | 83 project = MIRA |