annotate test-data/U13small_m.mira4_de_novo.fasta @ 17:5bbaa930d7fa draft

Uploaded v0.0.2 preview 9, more functional tests
author peterjc
date Mon, 03 Mar 2014 11:49:21 -0500
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17
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
peterjc
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1 >MIRA_rep_c1
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2 aaatttcataaaatttctcatttcaaaaacgagaaaattaaggccttgcggggttaaatc
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peterjc
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3 gttatcaagtaatcagtcggctcactgcccagtgtggacactggccaatattatggcacc
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4 agcctttgagaaaaggaaacctttttttgaatccatctccctgacctggggtttgggttg
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5 ggttttatcagcatagggtgacaggcaagttcaatctgattggatcctggatcccatcat
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6 ggggtatctgttcctaaatcattccctgatcctcggtcagagcgagcgcttaggttcccg
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7 ctgcagttaaacacctggttcatctgggcatactaaggttatgactttccacctgggagt
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8 ccacgacaactgaaaaaactcaaaacttctttaagtagaagttgagcctgaagctgaggc
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9 agctgtttcagagaggaggaggaggaggagatagcaaatgtcaagggatttccatttctc
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10 tttcaatgccaacatacttcagggcatcagcctggctgtatctgtaatcaaaaaacagtt
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11 cttcgcaagtctggatggctctcctgacaaaaacacctatcctgtgatcaccattaacca
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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12 tcataacttttgcatagcagtttggatttaccgaatgatttgcaaaacgaattttgttac
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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13 ccttgcaggttgcatccaccacaaaatcattgttcaagttgaacagaaagctgcacatgt
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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14 atttatcacacactttccctcttccgtcagcttagcttcaggaacctcgagtactgtggg
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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15 caatttagaaaaagaaaatgccgtttgaaattctgaatttgcaaagtactataagaataa
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16 tttatagcaatgagtttaaaactcaactttttattgccttctcaccagctgcaaagtgtt
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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17 ttgtaccagtgaatttttgcaataatgcagtatggtatatttttcaactttgaataaaga
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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18 atacttgaaattgaaaaaaaaaattgagtctgatgggtctagtgtgtttataaaatgact
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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19 taagatcccacagttattttaaagtaatacattactcaactggtattcattttgatgcca
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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20 ttattttattttataaaactagtcatccttgcagaagtgtatctgattaactcttgacaa
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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21 ctactttgcctattttattaacagctgcatttaacccacgtgacaggataactaatttct
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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22 attgtttttgtatttttgcctcctccttccaagatagcagtagagtactgtgttaaatct
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23 tgcttcagaagagcttgtttaaaatagttataaagaaagtaaaatacatagaaaaacacg
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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24 ttataattttaaattaaaaaagaaaaaagatgtctactctgaataaattatgcatacata
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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25 taaggtctgaacaaaaacatgaaaagatgggctctgagtatcaattttaaaaatctttac
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26 cagtataacattactcaaacaaaaattaaaatttaatataattaagtacatattccaaga
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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27 caacaaatggaccttgactgttaattctgg
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
peterjc
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28 >MIRA_rep_c2
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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29 gcaatatcgtgacgatatgtawgataaatacatgtgcagctytctgttcaacttgaacaa
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30 tgattttgtggtggatgcaacccgcaagggtaacaaaattcgttttgcaaatcattcggt
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31 aaatccaaactgctatgcaaaagttatgatggttaacggtgatcacaggatakgtatttt
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32 tgccaagagagccatccagactggcgaaragctgttttttgattacagatacagccaggc
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33 tgatgccctgaagtatgtcggcatcgaaagagaaatggaaatcccttgacatctgctacc
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34 tcctccccctcctctgaaacagctgccttagcttcaggaacctcgagtactgtgggcaat
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35 ttaaaaaaagaacatgcagtttgaaattctgaatttgcaaagtactgtaagaataattta
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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36 tagtaatgagtttaaaaatcaactttttattgccttctcaccagctgcaaagtgttttgt
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37 wccagtgaattttgcaataatgcagtatggtacattttcactttgaataaagaatacttg
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38 a
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39 >MIRA_rep_c3
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40 gcgttattaaagacttttttttwtttttttttcaagttcaagtattctttattcaaagtt
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
peterjc
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41 gaaaaatgtaccatactgcattattgcaaaaattcactggtacaaaacactttgcagctg
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
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42 gtgagaaggcaataaaaagttgatttttaaactcattactataaattattcttacagtac
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peterjc
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43 tttgcaaattcagaatttcaaactgcatgttctttttctaaattgcccacagtactcgag
5bbaa930d7fa Uploaded v0.0.2 preview 9, more functional tests
peterjc
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44 gttcctgaagctaaggcagctgtttcagaggagggggargaagtaycaaatytcwaggga
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peterjc
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45 tttccatttctctttccatgccgamatacttcagggcatcagcctgactgtmtctgtaat
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peterjc
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46 caaaaaacakctcttcgccavtctggatggctctctyggcaaaaatacctatcctgtgat
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peterjc
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47 caccgttaaccatcataacttttgcatagcattt