# HG changeset patch
# User peterjc
# Date 1541778790 18000
# Node ID f9dd4ba8c8a6c44eb71e79e8053c95a984a53ef1
# Parent  84e08689d35d9c0c24eae2d82546c5fa2db90483
planemo upload for repository https://github.com/peterjc/pico_galaxy/tree/master/tools/fastq_paired_unpaired commit 3ab3d1a9650dec0533344d710ceb027e482d2b10-dirty

diff -r 84e08689d35d -r f9dd4ba8c8a6 tools/fastq_paired_unpaired/fastq_paired_unpaired.py
--- a/tools/fastq_paired_unpaired/fastq_paired_unpaired.py	Fri Sep 15 10:24:24 2017 -0400
+++ b/tools/fastq_paired_unpaired/fastq_paired_unpaired.py	Fri Nov 09 10:53:10 2018 -0500
@@ -4,7 +4,7 @@
 The input file should be a valid FASTQ file which has been sorted so that
 any partner forward+reverse reads are consecutive. The output files all
 preserve this sort order. Pairing are recognised based on standard name
-suffices. See below or run the tool with no arguments for more details.
+suffixes. See below or run the tool with no arguments for more details.
 
 Note that the FASTQ variant is unimportant (Sanger, Solexa, Illumina, or even
 Color Space should all work equally well).
diff -r 84e08689d35d -r f9dd4ba8c8a6 tools/fastq_paired_unpaired/fastq_paired_unpaired.xml
--- a/tools/fastq_paired_unpaired/fastq_paired_unpaired.xml	Fri Sep 15 10:24:24 2017 -0400
+++ b/tools/fastq_paired_unpaired/fastq_paired_unpaired.xml	Fri Nov 09 10:53:10 2018 -0500
@@ -1,5 +1,5 @@
 <tool id="fastq_paired_unpaired" name="Divide FASTQ file into paired and unpaired reads" version="0.1.4">
-    <description>using the read name suffices</description>
+    <description>using the read name suffixes</description>
     <requirements>
         <requirement type="package" version="1.0.1">galaxy_sequence_utils</requirement>
         <requirement type="package" version="1.67">biopython</requirement>
@@ -65,7 +65,7 @@
 The input file should be a valid FASTQ file which has been sorted so that
 any partner forward+reverse reads are consecutive. The output files all
 preserve this sort order. Pairing are recognised based on standard name
-suffices. See below or run the tool with no arguments for more details.
+suffixes. See below or run the tool with no arguments for more details.
 
 Any reads where the forward/reverse naming suffix used is not recognised
 are treated as orphan reads. The tool supports the /1 and /2 convention
@@ -106,7 +106,7 @@
 Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013).
 Galaxy tools and workflows for sequence analysis with applications
 in molecular plant pathology. PeerJ 1:e167
-http://dx.doi.org/10.7717/peerj.167
+https://doi.org/10.7717/peerj.167
 
 This tool is available to install into other Galaxy Instances via the Galaxy
 Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/fastq_paired_unpaired