Mercurial > repos > peterjc > effectivet3

annotate test-data/four_human_proteins.fasta @ 14:1e681e19e35c draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded v0.0.12c, development moved to GitHub
author peterjc
date Tue, 17 Sep 2013 11:44:41 -0400
parents 7479dbb285b5
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
1 >sp|Q9BS26|ERP44_HUMAN Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
2 MHPAVFLSLPDLRCSLLLLVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRF
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
3 SQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMK
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
4 REYRGQRSVKALADYIRQQKSDPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYRVFER
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
5 VANILHDDCAFLSAFGDVSKPERYSGDNIIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
6 CVPLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHAD
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
7 CDKFRHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREF
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
8 HHGPDPTDTAPGEQAQDVASSPPESSFQKLAPSEYRYTLLRDRDEL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
9 >sp|Q9NSY1|BMP2K_HUMAN BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
10 MKKFSRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
11 GFSTVFLVRTHGGIRCALKRMYVNNMPDLNVCKREITIMKELSGHKNIVGYLDCAVNSIS
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
12 DNVWEVLILMEYCRAGQVVNQMNKKLQTGFTEPEVLQIFCDTCEAVARLHQCKTPIIHRD
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
13 LKVENILLNDGGNYVLCDFGSATNKFLNPQKDGVNVVEEEIKKYTTLSYRAPEMINLYGG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
14 KPITTKADIWALGCLLYKLCFFTLPFGESQVAICDGNFTIPDNSRYSRNIHCLIRFMLEP
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
15 DPEHRPDIFQVSYFAFKFAKKDCPVSNINNSSIPSALPEPMTASEAAARKSQIKARITDT
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
16 IGPTETSIAPRQRPKANSATTATPSVLTIQSSATPVKVLAPGEFGNHRPKGALRPGNGPE
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
17 ILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQ
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
18 QQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQY
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
19 QQAFFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSV
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
20 ADKEAIANFTNQKNISNPPDMSGWNPFGEDNFSKLTEEELLDREFDLLRSNRLEERASSD
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
21 KNVDSLSAPHNHPPEDPFGSVPFISHSGSPEKKAEHSSINQENGTANPIKNGKTSPASKD
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
22 QRTGKKTSVQGQVQKGNDESESDFESDPPSPKSSEEEEQDDEEVLQGEQGDFNDDDTEPE
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
23 NLGHRPLLMDSEDEEEEEKHSSDSDYEQAKAKYSDMSSVYRDRSGSGPTQDLNTILLTSA
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
24 QLSSDVAVETPKQEFDVFGAVPFFAVRAQQPQQEKNEKNLPQHRFPAAGLEQEEFDVFTK
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
25 APFSKKVNVQECHAVGPEAHTIPGYPKSVDVFGSTPFQPFLTSTSKSESNEDLFGLVPFD
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
26 EITGSQQQKVKQRSLQKLSSRQRRTKQDMSKSNGKRHHGTPTSTKKTLKPTYRTPERARR
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
27 HKKVGRRDSQSSNEFLTISDSKENISVALTDGKDRGNVLQPEESLLDPFGAKPFHSPDLS
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
28 WHPPHQGLSDIRADHNTVLPGRPRQNSLHGSFHSADVLKMDDFGAVPFTELVVQSITPHQ
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
29 SQQSQPVELDPFGAAPFPSKQ
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
30 >sp|P06213|INSR_HUMAN Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
31 MATGGRRGAAAAPLLVAVAALLLGAAGHLYPGEVCPGMDIRNNLTRLHELENCSVIEGHL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
32 QILLMFKTRPEDFRDLSFPKLIMITDYLLLFRVYGLESLKDLFPNLTVIRGSRLFFNYAL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
33 VIFEMVHLKELGLYNLMNITRGSVRIEKNNELCYLATIDWSRILDSVEDNYIVLNKDDNE
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
34 ECGDICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
35 GNCSQPDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCKNSRRQG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
36 CHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGC
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
37 TVINGSLIINIRGGNNLAAELEANLGLIEEISGYLKIRRSYALVSLSFFRKLRLIRGETL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
38 EIGNYSFYALDNQNLRQLWDWSKHNLTITQGKLFFHYNPKLCLSEIHKMEEVSGTKGRQE
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
39 RNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQ
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
40 NVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFS
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
41 DERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWE
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
42 RQAEDSELFELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
43 KELEESSFRKTFEDYLHNVVFVPRKTSSGTGAEDPRPSRKRRSLGDVGNVTVAVPTVAAF
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
44 PNTSSTSVPTSPEEHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYV
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
45 SARTMPEAKADDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCV
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
46 SRKHFALERGCRLRGLSPGNYSVRIRATSLAGNGSWTEPTYFYVTDYLDVPSNIAKIIIG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
47 PLIFVFLFSVVIGSIYLFLRKRQPDGPLGPLYASSNPEYLSASDVFPCSVYVPDEWEVSR
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
48 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
49 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
50 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
51 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
52 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSFFHSEENKAPESEELEME
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
53 FEDMENVPLDRSSHCQREEAGGRDGGSSLGFKRSYEEHIPYTHMNGGKKNGRILTLPRSN
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
54 PS
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
55 >sp|P08100|OPSD_HUMAN Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
56 MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLY
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
57 VTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLG
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
58 GEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIP
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
59 EGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQES
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
60 ATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAI
7479dbb285b5 Uploaded v0.0.10, adds unit test
peterjc
parents:
diff changeset
61 YNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA