# HG changeset patch
# User peterjc
# Date 1369058409 14400
# Node ID bf634ebee84cc5cc9ae4cbbe5208be6f6441dfdb
# Parent  58359ce5bde9a616833b0afeb1f595f3b6b40ae9
Uploaded v0.0.7, minor changes to documentation and dependency management

diff -r 58359ce5bde9 -r bf634ebee84c tools/ncbi_blast_plus/blastxml_to_top_descr.txt
--- a/tools/ncbi_blast_plus/blastxml_to_top_descr.txt	Mon Apr 29 13:09:07 2013 -0400
+++ b/tools/ncbi_blast_plus/blastxml_to_top_descr.txt	Mon May 20 10:00:09 2013 -0400
@@ -9,6 +9,9 @@
 identifiers with description for the top matches (by default the top 3), and
 output these as a simple tabular file along with the query identifiers.
 
+It is available from the Galaxy Tool Shed at:
+http://toolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr
+
 This requires the 'blast_datatypes' repository from the Galaxy Tool Shed
 to provide the 'blastxml' file format definition.
 
@@ -53,6 +56,8 @@
 v0.0.4 - Quote filenames in case they contain spaces (internal change)
 v0.0.5 - Include number of queries with BLAST matches in stdout (peek text)
 v0.0.6 - Check for errors via the script's return code (internal change)
+v0.0.7 - Link to Tool Shed added to help text and this documentation.
+       - Tweak dependency on blast_datatypes too also work on Test Tool Shed
 
 
 Developers
diff -r 58359ce5bde9 -r bf634ebee84c tools/ncbi_blast_plus/blastxml_to_top_descr.xml
--- a/tools/ncbi_blast_plus/blastxml_to_top_descr.xml	Mon Apr 29 13:09:07 2013 -0400
+++ b/tools/ncbi_blast_plus/blastxml_to_top_descr.xml	Mon May 20 10:00:09 2013 -0400
@@ -1,4 +1,4 @@
-<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.0.6">
+<tool id="blastxml_to_top_descr" name="BLAST top hit descriptions" version="0.0.7">
     <description>Make a table from BLAST XML</description>
     <version_command interpreter="python">blastxml_to_top_descr.py --version</version_command>
     <command interpreter="python">
@@ -49,5 +49,10 @@
 to spot some problems (e.g. bacterial contaimination could be very
 obvious).
 
+**Citation**
+
+This wrapper is available to install into other Galaxy Instances via the Galaxy
+Tool Shed at http://toolshed.g2.bx.psu.edu/view/peterjc/blastxml_to_top_descr
+
     </help>
 </tool>
diff -r 58359ce5bde9 -r bf634ebee84c tools/ncbi_blast_plus/repository_dependencies.xml
--- a/tools/ncbi_blast_plus/repository_dependencies.xml	Mon Apr 29 13:09:07 2013 -0400
+++ b/tools/ncbi_blast_plus/repository_dependencies.xml	Mon May 20 10:00:09 2013 -0400
@@ -1,5 +1,5 @@
 <?xml version="1.0"?>
 <repositories description="This requires the BLAST datatype definitions (e.g. the BLAST XML format).">
 <!-- Revision 4:f9a7783ed7b6 on the main tool shed is v0.0.14 which added BLAST databases -->
-<repository toolshed="http://toolshed.g2.bx.psu.edu" name="blast_datatypes" owner="devteam" changeset_revision="f9a7783ed7b6" />
+<repository name="blast_datatypes" owner="devteam" changeset_revision="f9a7783ed7b6" />
 </repositories>