# HG changeset patch # User peterjc # Date 1599736436 0 # Node ID 38fe3aaa15aa864f05e783bc1ed27dc2f56c4d3f # Parent ddbdf5e7296acd396f8984044562c4d78589ced2 "planemo upload for repository https://github.com/peterjc/galaxy_blast/tree/master/tools/blast_rbh commit eb20367d88fc595a7d274321494ef98e919f4747-dirty" diff -r ddbdf5e7296a -r 38fe3aaa15aa test-data/rbh_blastn_three_human_mRNA_vs_rhodopsin_nucs.tabular --- a/test-data/rbh_blastn_three_human_mRNA_vs_rhodopsin_nucs.tabular Thu Aug 20 20:15:11 2020 +0000 +++ b/test-data/rbh_blastn_three_human_mRNA_vs_rhodopsin_nucs.tabular Thu Sep 10 11:13:56 2020 +0000 @@ -1,2 +1,2 @@ #A_id B_id A_length B_length A_qcovhsp B_qcovhsp length pident bitscore -ENA|BC112106|BC112106.1 gi|57163782|ref|NM_001009242.1| 1213 1047 86 100 1047 92.073 1514 +ENA|BC112106|BC112106.1 gi|57163782|ref|NM_001009242.1| 1213 1047 86 100 1047 92.073 1515 diff -r ddbdf5e7296a -r 38fe3aaa15aa tools/blast_rbh/README.rst --- a/tools/blast_rbh/README.rst Thu Aug 20 20:15:11 2020 +0000 +++ b/tools/blast_rbh/README.rst Thu Sep 10 11:13:56 2020 +0000 @@ -95,6 +95,7 @@ v0.1.12 - Use ```` (internal change only). - Single quote command line arguments (internal change only). v0.2.0 - Refactored to use more than one Python file (internal change only). +v0.3.0 - Updated to BLAST+ 2.9.0 via conda; removed legacy tool packages. ======= ====================================================================== diff -r ddbdf5e7296a -r 38fe3aaa15aa tools/blast_rbh/blast_rbh.xml --- a/tools/blast_rbh/blast_rbh.xml Thu Aug 20 20:15:11 2020 +0000 +++ b/tools/blast_rbh/blast_rbh.xml Thu Sep 10 11:13:56 2020 +0000 @@ -1,8 +1,8 @@ - + from two FASTA files - biopython - blast + biopython + blast python $__tool_directory__/blast_rbh.py --version