Mercurial > repos > peter-waltman > ucsc_cluster_tools2

view cluster.tools/consensus.clustering.py @ 0:0decf3fd54bc draft

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author peter-waltman
date Thu, 28 Feb 2013 01:45:39 -0500
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#!/usr/bin/env python
import os
import sys
import subprocess

select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "consensus.clustering.R")

cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:] 

proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE )
(stdoutdata, stderrdata) = proc.communicate()
if proc.returncode:
	sys.stderr.write(stderrdata)
sys.stdout.write(stdoutdata)