Mercurial > repos > peter-waltman > ucsc_cluster_tools2
diff cluster.tools/cutree.xml @ 1:dddfeedb85af draft
Uploaded
author | peter-waltman |
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date | Fri, 01 Mar 2013 10:16:53 -0500 |
parents | 0decf3fd54bc |
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--- a/cluster.tools/cutree.xml Thu Feb 28 01:45:39 2013 -0500 +++ b/cluster.tools/cutree.xml Fri Mar 01 10:16:53 2013 -0500 @@ -13,7 +13,7 @@ <data format="rdata" name="rdata_output" label="Cutree from Hierarchical Clustering Result (RData)"/> </outputs> <help> -- **Cluster Result** - Specify the cluster result to analayze (MUST BE IN rdata format), and must contain the same objects that are produced by the 'Partition Clustering,' 'Hierarchical Clustering (HAC),' or 'Consensus Clustering' tools. Specifically, it must contain the following objects +- **Cluster Result** - Specify the cluster result to analayze (MUST BE IN rdata format), and must contain the same objects that are produced by the 'Hierarchical Clustering (HAC),' tool. Specifically, it must contain the following objects: * A 'treecl.res' or 'partcl.res' object - corresponding to whether the cluster results is from a partition or tree clustering method * A 'data' object that contains the data that was passed into the clustering method. NOTE, it is better for this to be the actual data passed in, rather than the data prior to the pre-processing that was performed prior to the actual clustering.