Mercurial > repos > peter-waltman > ucsc_cluster_tools2

diff cluster.tools/remove.nulls.xml @ 0:0decf3fd54bc draft

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author peter-waltman
date Thu, 28 Feb 2013 01:45:39 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/cluster.tools/remove.nulls.xml	Thu Feb 28 01:45:39 2013 -0500
@@ -0,0 +1,27 @@
+<tool id="remove_null_samples" name="Remove Null Samples" force_history_refresh="True">
+    <command interpreter="python">remove.nulls.py
+-d $dataset
+-o ${output}
+
+</command>
+    <inputs>
+    	<param name="dataset" type="data" format='tabular' label="IPL Matrix from Paradigm containing Null and Real Samples"/>
+    </inputs>
+    <outputs>
+        <data format="tabular" name="output" label="Real Sample-only IPL Matrix"/>
+    </outputs>
+<help>
+.. class:: infomark
+     
+**Remove Null Samples** - Tool to remove the 'null' samples from an IPL matrix result from Paradigm
+
+**OUTPUT:**  A new matrix without null samples
+
+----
+
+**Parameters**
+
+- **IPL Matrix from Paradigm that contains null samples** Input matrix that potentially contains null samples
+
+</help>
+</tool>