comparison cluster.tools/rnaseq.feature.selection.py @ 1:dddfeedb85af draft

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1:dddfeedb85af

#!/usr/bin/env python
import os
import sys
import subprocess

select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "rnaseq.feature.selection.R")

cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:] 

proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE )
(stdoutdata, stderrdata) = proc.communicate()
if proc.returncode:
	sys.stderr.write(stderrdata)
sys.stdout.write(stdoutdata)