Mercurial > repos > peter-waltman > ucsc_cluster_tools2

comparison cluster.tools/rnaseq.feature.selection.R @ 3:563832f48c08 draft

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author peter-waltman
date Fri, 01 Mar 2013 19:51:25 -0500
parents dddfeedb85af
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comparison
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2:b8f262149ee2 3:563832f48c08
44 44
45 lib.load.quiet(getopt) 45 lib.load.quiet(getopt)
46 46
47 spec <- matrix( c( "data.fname", "d", 1, "character", 47 spec <- matrix( c( "data.fname", "d", 1, "character",
48 "output.fname", "o", 2, "character", 48 "output.fname", "o", 2, "character",
49 "var.method", "m", 2, "character", ## must be either 'active', 'inactive' or 'modulated' 49 "var.method", "m", 2, "character",
50 "z.transform", "z", 2, "character", 50 "z.transform", "z", 2, "character",
51 "perc.pass", "p", 2, "numeric" 51 "perc.pass", "p", 2, "numeric"
52 ), 52 ),
53 nc=4, 53 nc=4,
54 byrow=TRUE 54 byrow=TRUE