Mercurial > repos > peter-waltman > ucsc_cluster_tools2
comparison cluster.tools/ipl.feature.selection.py @ 0:0decf3fd54bc draft
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author | peter-waltman |
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date | Thu, 28 Feb 2013 01:45:39 -0500 |
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-1:000000000000 | 0:0decf3fd54bc |
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1 #!/usr/bin/env python | |
2 import os | |
3 import sys | |
4 import subprocess | |
5 | |
6 select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "ipl.feature.selection.R") | |
7 | |
8 cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:] | |
9 | |
10 proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE ) | |
11 (stdoutdata, stderrdata) = proc.communicate() | |
12 if proc.returncode: | |
13 sys.stderr.write(stderrdata) | |
14 sys.stdout.write(stdoutdata) |