Mercurial > repos > peter-waltman > ucsc_cluster_tools2
annotate cluster.tools/gen.survival.curves.py @ 9:a3c03541fe6f draft default tip
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| author | peter-waltman |
|---|---|
| date | Mon, 11 Mar 2013 17:30:48 -0400 |
| parents | 0decf3fd54bc |
| children |
| rev | line source |
|---|---|
| 0 | 1 #!/usr/bin/env python |
| 2 import os | |
| 3 import sys | |
| 4 import subprocess | |
| 5 | |
| 6 select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "gen.survival.curves.R") | |
| 7 | |
| 8 cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:] | |
| 9 | |
| 10 proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE ) | |
| 11 (stdoutdata, stderrdata) = proc.communicate() | |
| 12 if proc.returncode: | |
| 13 sys.stderr.write(stderrdata) | |
| 14 sys.stdout.write(stdoutdata) |