Mercurial > repos > peter-waltman > ucsc_cluster_tools2

annotate cluster.tools/dichotomize.sample.clusters.py @ 7:2efa1a284546 draft

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author peter-waltman
date Mon, 04 Mar 2013 04:11:28 -0500
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1 #!/usr/bin/env python
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2 import os
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3 import sys
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4 import subprocess
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6 select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "dichotomize.sample.clusters.R")
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8 cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:]
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10 proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE )
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11 (stdoutdata, stderrdata) = proc.communicate()
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12 if proc.returncode:
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13 sys.stderr.write(stderrdata)
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14 sys.stdout.write(stdoutdata)