Mercurial > repos > peter-waltman > ucsc_cluster_tools
comparison cluster.tools/cutree.py @ 2:b442996b66ae draft
Uploaded
| author | peter-waltman |
|---|---|
| date | Wed, 27 Feb 2013 20:17:04 -0500 |
| parents | |
| children |
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| 1:e25d2bece0a2 | 2:b442996b66ae |
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| 1 #!/usr/bin/env python | |
| 2 import os | |
| 3 import sys | |
| 4 import subprocess | |
| 5 | |
| 6 select_script_path = os.path.join(os.path.dirname(os.path.realpath(__file__)), "cutree.R") | |
| 7 | |
| 8 cmd_args = [ "Rscript", select_script_path ] + sys.argv[1:] | |
| 9 | |
| 10 proc = subprocess.Popen( cmd_args, stderr=subprocess.PIPE, stdout=subprocess.PIPE ) | |
| 11 (stdoutdata, stderrdata) = proc.communicate() | |
| 12 if proc.returncode: | |
| 13 sys.stderr.write(stderrdata) | |
| 14 sys.stdout.write(stdoutdata) |
