Mercurial > repos > pavanvidem > dexseq
view tool_dependencies.xml @ 15:b7e9bf50295c draft
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author | pavanvidem |
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date | Tue, 01 Sep 2015 08:19:08 -0400 |
parents | a6949dd64d9c |
children | 33c17175e3d6 |
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<?xml version="1.0"?> <tool_dependency> <package name="R" version="3.2.0"> <repository changeset_revision="d973c8e9b29e" name="package_r_3_2_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> </package> <package name="DEXSeq" version="1.14.2"> <install version="1.0"> <actions> <action type="setup_r_environment"> <repository changeset_revision="d973c8e9b29e" name="package_r_3_2_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> <package name="R" version="3.2.0" /> </repository> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Cairo_1.5-8.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/rjson_0.2.15.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/getopt_1.20.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/lambda.r_1.1.7.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/futile.options_1.0.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/futile.logger_1.4.1.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/snow_0.3-13.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/BiocParallel_1.2.20.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/BiocGenerics_0.14.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Biobase_2.28.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/S4Vectors_0.6.4.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/IRanges_2.2.7.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/GenomeInfoDb_1.4.2.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/XVector_0.8.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/GenomicRanges_1.20.5.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Rcpp_0.12.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/RcppArmadillo_0.5.400.2.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/DBI_0.3.1.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/RSQLite_1.0.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/AnnotationDbi_1.30.1.tar.gz</package> 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<package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/munsell_0.4.2.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/labeling_0.3.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/scales_0.3.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/proto_0.3-10.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/MASS_7.3-44.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/ggplot2_1.0.1.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Formula_1.2-1.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/latticeExtra_0.6-26.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/cluster_2.0.3.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/rpart_4.1-10.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/nnet_7.3-11.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/acepack_1.3-3.3.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/foreign_0.8-66.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/gridExtra_2.0.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Hmisc_3.16-0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/DESeq2_1.8.1.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/bitops_1.0-6.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/RCurl_1.95-4.7.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/biomaRt_2.24.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/hwriter_1.3.2.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/zlibbioc_1.14.0.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Biostrings_2.36.4.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/Rsamtools_1.20.4.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/statmod_1.4.21.tar.gz</package> <package>https://github.com/bgruening/download_store/raw/master/DEXSeq_1.14.2/DEXSeq_1.14.2.tar.gz</package> </action> </actions> </install> <readme> DEXSeq in version </readme> </package> </tool_dependency>