# HG changeset patch
# User pavanvidem
# Date 1376927238 14400
# Node ID daa913e85b5a83f2aa028edd0a33b3708f4dad81

Uploaded

diff -r 000000000000 -r daa913e85b5a tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Aug 19 11:47:18 2013 -0400
@@ -0,0 +1,64 @@
+<?xml version="1.0"?>
+<tool_dependency>
+
+   <package name="blockbuster" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://www.bioinf.uni-leipzig.de/~david/LIFE/blockbuster.tar.gz</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>blockbuster.x</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+	
+        </readme>
+    </package>
+
+   <package name="EDeN" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://www.bioinf.uni-freiburg.de/~costa/EDeN.tgz</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>EDeN</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+	
+        </readme>
+    </package>
+
+
+
+<!--
+    <package name="BEDTools" version="1.0">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>bin/bamToBed</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+	
+        </readme>
+    </package>
+-->
+</tool_dependency>