# HG changeset patch
# User pavanvidem
# Date 1376921485 14400
# Node ID b9c1764db899429c4c8e29d542908ea2f0b79b1a
# Parent  71381216208127dfaeecfbfefa1984e892fff978
Uploaded

diff -r 713812162081 -r b9c1764db899 tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Aug 19 08:57:02 2013 -0400
+++ b/tool_dependencies.xml	Mon Aug 19 10:11:25 2013 -0400
@@ -18,4 +18,22 @@
 	
         </readme>
     </package>
+    <package name="BEDTools" version="1.0">
+        <install version="2.17.0">
+            <actions>
+                <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>bin/*</source>
+                    <destination>$INSTALL_DIR/bin</destination>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+	
+        </readme>
+    </package>
 </tool_dependency>