Mercurial > repos > pavanvidem > blockbuster
comparison tool_dependencies.xml @ 12:8b1ecf4c1cc6 draft default tip
Uploaded
| author | pavanvidem |
|---|---|
| date | Mon, 19 Aug 2013 11:45:09 -0400 |
| parents | 2b72295385ef |
| children |
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| 11:2b72295385ef | 12:8b1ecf4c1cc6 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <!-- | 3 |
| 4 <package name="blockbuster" version="1.0"> | 4 <package name="blockbuster" version="1.0"> |
| 5 <install version="1.0"> | 5 <install version="1.0"> |
| 6 <actions> | 6 <actions> |
| 7 <action type="download_by_url">http://www.bioinf.uni-leipzig.de/~david/LIFE/blockbuster.tar.gz</action> | 7 <action type="download_by_url">http://www.bioinf.uni-leipzig.de/~david/LIFE/blockbuster.tar.gz</action> |
| 8 <action type="shell_command">make</action> | 8 <action type="shell_command">make</action> |
| 18 <readme> | 18 <readme> |
| 19 | 19 |
| 20 </readme> | 20 </readme> |
| 21 </package> | 21 </package> |
| 22 | 22 |
| 23 <package name="EDeN" version="1.0"> | |
| 24 <install version="1.0"> | |
| 25 <actions> | |
| 26 <action type="download_by_url">http://www.bioinf.uni-freiburg.de/~costa/EDeN.tgz</action> | |
| 27 <action type="shell_command">make</action> | |
| 28 <action type="move_file"> | |
| 29 <source>EDeN</source> | |
| 30 <destination>$INSTALL_DIR/bin</destination> | |
| 31 </action> | |
| 32 <action type="set_environment"> | |
| 33 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 34 </action> | |
| 35 </actions> | |
| 36 </install> | |
| 37 <readme> | |
| 38 | |
| 39 </readme> | |
| 40 </package> | |
| 23 | 41 |
| 42 | |
| 43 | |
| 44 <!-- | |
| 24 <package name="BEDTools" version="1.0"> | 45 <package name="BEDTools" version="1.0"> |
| 25 <install version="1.0"> | 46 <install version="1.0"> |
| 26 <actions> | 47 <actions> |
| 27 <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action> | 48 <action type="download_by_url">http://bedtools.googlecode.com/files/BEDTools.v2.17.0.tar.gz</action> |
| 28 <action type="shell_command">make</action> | 49 <action type="shell_command">make</action> |
| 37 </install> | 58 </install> |
| 38 <readme> | 59 <readme> |
| 39 | 60 |
| 40 </readme> | 61 </readme> |
| 41 </package> | 62 </package> |
| 42 | |
| 43 --> | 63 --> |
| 44 <package name="blockbuster" version="1.0"> | |
| 45 <install version="1.0"> | |
| 46 <actions> | |
| 47 <action type="download_by_url">http://www.bioinf.uni-freiburg.de/~costa/EDeN.tgz</action> | |
| 48 <action type="shell_command">make</action> | |
| 49 <action type="move_file"> | |
| 50 <source>EDeN</source> | |
| 51 <destination>$INSTALL_DIR/bin</destination> | |
| 52 </action> | |
| 53 <action type="set_environment"> | |
| 54 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | |
| 55 </action> | |
| 56 </actions> | |
| 57 </install> | |
| 58 <readme> | |
| 59 | |
| 60 </readme> | |
| 61 </package> | |
| 62 </tool_dependency> | 64 </tool_dependency> |