Mercurial > repos > p.lucas > ssuisserotyping_pipeline
changeset 3:d30476d83afe draft default tip
Fix output error
author | p.lucas |
---|---|
date | Thu, 09 May 2019 05:05:32 -0400 |
parents | fbac2ea88cf3 |
children | |
files | SsuisSerotyping_pipeline.xml |
diffstat | 1 files changed, 8 insertions(+), 8 deletions(-) [+] |
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--- a/SsuisSerotyping_pipeline.xml Thu May 09 04:57:01 2019 -0400 +++ b/SsuisSerotyping_pipeline.xml Thu May 09 05:05:32 2019 -0400 @@ -68,14 +68,14 @@ </conditional> </inputs> <outputs> - <data name="output1" format="txt" label="${tool.name} on ${on_string}: Results_FinalResults.txt" /> - <data name="output2" format="txt" label="${tool.name} on ${on_string}: Results_MLSTResults.txt" /> - <data name="output3" format="txt" label="${tool.name} on ${on_string}: Results_recN__fullgenes__recN_full__results.txt" /> - <data name="output4" format="txt" label="${tool.name} on ${on_string}: Results_speciesConfirmation.txt" /> - <data name="output5" format="txt" label="${tool.name} on ${on_string}: Results_FinalSerotypingResults.txt" /> - <data name="output6" format="txt" label="${tool.name} on ${on_string}: Results_InitialCapsuleResults.txt" /> - <data name="output7" format="txt" label="${tool.name} on ${on_string}: Results_VirulenceFactors__fullgenes__Virulence__results.txt" /> - <data name="output8" format="txt" label="${tool.name} on ${on_string}: Results_VirulenceFactorResults.txt" /> + <data name="output1" format="txt" label="${tool.name} on ${on_string}: Results_FinalResults.txt" from_work_dir="Results_FinalResults.txt"/> + <data name="output2" format="txt" label="${tool.name} on ${on_string}: Results_MLSTResults.txt" from_work_dir="Results_MLSTResults.txt"/> + <data name="output3" format="txt" label="${tool.name} on ${on_string}: Results_recN__fullgenes__recN_full__results.txt" from_work_dir="Results_recN__fullgenes__recN_full__results.txt" /> + <data name="output4" format="txt" label="${tool.name} on ${on_string}: Results_speciesConfirmation.txt" from_work_dir="Results_speciesConfirmation.txt" /> + <data name="output5" format="txt" label="${tool.name} on ${on_string}: Results_FinalSerotypingResults.txt" from_work_dir="Results_FinalSerotypingResults.txt" /> + <data name="output6" format="txt" label="${tool.name} on ${on_string}: Results_InitialCapsuleResults.txt" from_work_dir="Results_InitialCapsuleResults.txt" /> + <data name="output7" format="txt" label="${tool.name} on ${on_string}: Results_VirulenceFactors__fullgenes__Virulence__results.txt" from_work_dir="Results_VirulenceFactors__fullgenes__Virulence__results.txt" /> + <data name="output8" format="txt" label="${tool.name} on ${on_string}: Results_VirulenceFactorResults.txt" from_work_dir="Results_VirulenceFactorResults.txt" /> </outputs> <tests> <test>