Mercurial > repos > p.lucas > extract_fasta_subsequence

changeset 6:612269711364 draft default tip

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Uploaded
author p.lucas
date Wed, 26 Sep 2018 08:48:08 -0400
parents 76a5d10c40f0
children
files exseq_multi.py
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/exseq_multi.py	Wed Sep 26 08:43:11 2018 -0400
+++ b/exseq_multi.py	Wed Sep 26 08:48:08 2018 -0400
@@ -46,7 +46,7 @@
   with open(infile, "rU") as inf:
     # Input treatment :
     for rec in SeqIO.parse(inf, "fasta"):
-      outputfile.write(rec.id+'\n')
+      outputfile.write('>'+rec.id+'\n')
       outputfile.write(str(rec.seq[int(spos):int(epos)])+'\n')    
 
   # Fermeture des fichiers.