# HG changeset patch
# User p.lucas
# Date 1617114036 0
# Node ID 58b36867b5772ca7d37d5cf46f3794715a5e6970
# Parent  9a66e3a9ff53cfa68e25e38d7e5c79a914e7c989
Fix bug to load env

diff -r 9a66e3a9ff53 -r 58b36867b577 anarci_wrapper.xml
--- a/anarci_wrapper.xml	Mon Mar 29 10:46:35 2021 +0000
+++ b/anarci_wrapper.xml	Tue Mar 30 14:20:36 2021 +0000
@@ -1,8 +1,8 @@
 <tool id="ANARCI" name="ANARCI" version="1.0">
-  <description>Use ANARCUI tools to use HADDOCK-antibody-antigen after.</description>
+  <description>Use ANARCI tools to use HADDOCK-antibody-antigen after.</description>
   <command detect_errors="exit_code"><![CDATA[
-    conda activate Ab-HADDOCK;
-    python2.7 ImmunoPDB.py -i '${input}' -o '${output}' --scheme ${scheme} --splitscfv
+    source /home/galaxy/data/_conda/bin/activate Ab-HADDOCK;
+    python2.7 /home/galaxy/shed_tools/testtoolshed.g2.bx.psu.edu/repos/p.lucas/anarci/9a66e3a9ff53/anarci/HADDOCK-antibody-antigen/ImmunoPDB.py -i '${input}' -o '${output}' --scheme ${scheme} --splitscfv
     #if $receptor
       --receptor ${receptor}
     #end if;
@@ -15,7 +15,8 @@
     #if $splitscfv
       --splitscfv
     #end if;
-    conda deactivate
+    ;
+    source /home/galaxy/data/_conda/bin/deactivate
   ]]></command>
   <inputs>
     <param format="pdb" name="input" type="data" label="Select your PDB file."/>