Mercurial > repos > oinizan > frogs
diff preprocess.xml @ 2:ea386220db3c draft
"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.2 commit 724acdef433b0c23e12c0c689da342bf5e753da2"
| author | oinizan |
|---|---|
| date | Thu, 08 Apr 2021 07:29:32 +0000 |
| parents | 27f57425dc55 |
| children | 828d2003af85 |
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--- a/preprocess.xml Wed Mar 03 17:24:12 2021 +0000 +++ b/preprocess.xml Thu Apr 08 07:29:32 2021 +0000 @@ -15,11 +15,11 @@ # You should have received a copy of the GNU General Public License # along with this program. If not, see <http://www.gnu.org/licenses/>. --> -<tool id="FROGS_preprocess" name="FROGS Pre-process" version="3.2.1"> +<tool id="FROGS_preprocess" name="FROGS Pre-process" version="3.2.2"> <description>merging, denoising and dereplication.</description> <requirements> - <requirement type="package" version="3.2.1">frogs</requirement> - <requirement type="package" version="2.15.1">vsearch</requirement> + <requirement type="package" version="3.2.2">frogs</requirement> + <requirement type="package" version="2.17.0">vsearch</requirement> <requirement type="package" version="1.2.11">flash</requirement> <requirement type="package" version="2.10">cutadapt</requirement> </requirements> @@ -112,7 +112,7 @@ <option value="archive">TAR Archive</option> </param> <when value="archive"> - <param name="archive_file" type="data" format="tar" label="TAR archive file" help="The TAR file containing the sequences file(s) for each sample." optional="false" /> + <param name="archive_file" type="data" format="tar,tar.gz" label="TAR archive file" help="The TAR file containing the sequences file(s) for each sample." optional="false" /> <conditional name="archive_type"> <param name="archive_type_selected" type="select" label="Are reads already merged ?" help="The archive contains 1 file by sample : R1 and R2 pair are already merged in one sequence."> <option value="paired" selected="true">No</option> @@ -210,7 +210,7 @@ <option value="archive">TAR Archive</option> </param> <when value="archive"> - <param name="archive_file" type="data" format="tar" label="TAR archive file" help="The TAR file containing the sequences file for each sample." optional="false" /> + <param name="archive_file" type="data" format="tar,tar.gz" label="TAR archive file" help="The TAR file containing the sequences file for each sample." optional="false" /> </when> <when value="files_by_samples"> <repeat name="samples" title="Samples" min="1">