diff normalisation.xml @ 2:ea386220db3c draft

"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/tree/v3.2.2 commit 724acdef433b0c23e12c0c689da342bf5e753da2"

--- a/normalisation.xml	Wed Mar 03 17:24:12 2021 +0000
+++ b/normalisation.xml	Thu Apr 08 07:29:32 2021 +0000
@@ -15,10 +15,10 @@
 # You should have received a copy of the GNU General Public License
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 -->
-<tool id="FROGS_normalisation" name="FROGS Abundance normalisation" version="3.2.1">
-        <description>Normalize OTUs abundance.</description>
+<tool id="FROGS_normalisation" name="FROGS Abundance normalisation" version="3.2.2">
+        <description>Normalise OTUs abundance.</description>
         <requirements>
-                <requirement type="package" version="3.2.1">frogs</requirement>
+                <requirement type="package" version="3.2.2">frogs</requirement>
         </requirements>
         <stdio>
                 <exit_code range="1:" />
@@ -34,13 +34,13 @@
 		                       --summary-file $summary_file 
 	</command>
 	<inputs>
-		<param format="fasta" name="input_fasta" type="data" label="Sequence file" help="Sequence file to normalize (format: fasta)." />
-		<param format="biom1" name="input_biom" type="data" label="Abundance file" help="Abundance file to normalize (format: BIOM)." />
+		<param format="fasta" name="input_fasta" type="data" label="Sequence file" help="Sequence file to normalise (format: fasta)." />
+		<param format="biom1" name="input_biom" type="data" label="Abundance file" help="Abundance file to normalise (format: BIOM)." />
 		<param name="num_reads" type="integer" optional="false" min="1" value="" label="Number of reads" help="The final number of reads per sample." />
 	</inputs>
 	<outputs>
-		<data format="fasta" name="output_fasta" label="${tool.name}: normalized.fasta" from_work_dir="normalized.fasta" />
-		<data format="biom1" name="output_biom" label="${tool.name}: normalized.biom" from_work_dir="normalized.biom" />
+		<data format="fasta" name="output_fasta" label="${tool.name}: normalised_sequences.fasta" from_work_dir="normalised.fasta" />
+		<data format="biom1" name="output_biom" label="${tool.name}: normalised_abundance.biom" from_work_dir="normalised.biom" />
 		<data format="html" name="summary_file" label="${tool.name}: report.html" from_work_dir="report.html" />
 	</outputs>
     <tests>